G105694


Basic Information

Item Value
gene id G105694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2212323 ~ 2213776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119293
TTACTCACCATAAACTGGAGGATTCTAAACGGAATTTACTCAACATATACTGGAGGGTTCTAAACAGAATTTACTCACCATATACTGGAGGATTCTAAACAGAATTTACTCACCATATACTGGAGGATTCTAAACAGAATTTACTCACCATATACTGGAGGATTCTAAACGGAATTTACTCACCATATACTTGAGGGTTCTAAACGGAATTTACTCACCATATACTGGAGGGTTCTAAACGGAATTTACTCACCATATACTGGAGGGTTCTAAACGGAATTTACTCACCATATACTGGAGGGTTCTAAACAGAATTTACTCACCATATACTGGAGGGTTCTAAATGGAATTTACTCACCATATACTGGAGGGTTCTAAACGGAATTTACTCACCATATACTGGAGGGTTCTAAAGGGAATTTACTCACCATATACTGGAGGGTTCTAAATGGAATTTACTCACCATATACTGGAGGGTTCTAAACGGAATTTACTCACCATATACTGGAGGGTTCTAAACGGAATTTACTCACCATATACTGGAGGGTTCTAAATGGAATTTACTCACCATATACTGGAGGGTTCTAAACGGAATTTACTCACCATATACTGGAGGGTTCTAAAGGGAATTTACTCACCATATACTGGAGGGTTCTAAACAGAATTTACTCACCATATACTGGAGGTTCCAAACGGTATTTACTCACCATATACTGGAGGGTTCTAAACAGTATTTACTCACCATATACTGGAGGATTCTACATGGTATTTACTCACCATATACTGGAGGATTTTAAATGGAATTCACTCACCATATACTGGAGGGTTCCACATGGTATTTACTCACCATATACTGGAGGGTTCTAAACAGTATTTACTCACCATATACTGGAGGGTTCTACATGGTATTTACTCACCATATACTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119293 True 929 lncRNA 0.38 3 2212323 2213776

Neighbor

gene id symbol gene type direction distance location
LOC118944029 NA coding upstream 34327 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 91868 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 310875 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 358753 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 417385 1745298 ~ 1794938 (+)
LOC118944030 NA coding downstream 204410 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 764460 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 765010 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 1193411 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1837007 4050783 ~ 4065607 (+)
G105683 NA non-coding upstream 21034 2184048 ~ 2191289 (+)
G105673 NA non-coding upstream 49283 2161395 ~ 2163040 (+)
G105672 NA non-coding upstream 51294 2160815 ~ 2161029 (+)
G105670 NA non-coding upstream 51836 2159572 ~ 2160487 (+)
G105654 NA non-coding upstream 63612 2148466 ~ 2148711 (+)
G105700 NA non-coding downstream 9423 2223199 ~ 2223419 (+)
G105702 NA non-coding downstream 11942 2225718 ~ 2226088 (+)
G105704 NA non-coding downstream 13694 2227470 ~ 2227727 (+)
G105738 NA non-coding downstream 19027 2232803 ~ 2233739 (+)
G105740 NA non-coding downstream 20286 2234062 ~ 2235517 (+)
G105042 NA other upstream 501766 1708969 ~ 1710557 (+)
G105036 NA other upstream 511892 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 859460 1309202 ~ 1390936 (+)
G104761 NA other upstream 1058574 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1339808 860459 ~ 872515 (+)
G106019 NA other downstream 306940 2520716 ~ 2527972 (+)
G106122 NA other downstream 504185 2717961 ~ 2718525 (+)
G106240 NA other downstream 761047 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 993021 3006312 ~ 3391033 (+)

Expression


Co-expression Network