G105702



Basic Information


Item Value
gene id G105702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2225718 ~ 2226088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU119303
atcaagtcgacaatctactggcaaatccttttaaaTCCTACGAAGATAAATTATGAAGAAGAATGACAGATTAAACatatcggccattggacatatacattacacaacaagttgtaaATAGCAAATTCAACAATCAgaggtttggaaggaatcagcggctaactgcaagcatttcAAAGCAATCACTatcctgctattcagtggagtggctgtgtggtcccaagtctgggtttaagggtctgtTTTCCaggcttaaaaggataaacattccacattgaccatgctgtcaatccagcatgaatTCAGCCTTTTtccaaaacaactggaaactcagaactgggaaactggatttcagtgagttcaagacgaCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119303 True 371 lncRNA 0.41 1 2225718 2226088

Neighbor


gene id symbol gene type direction distance location
LOC118944029 NA coding upstream 47722 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 105263 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 324270 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 372148 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 430780 1745298 ~ 1794938 (+)
LOC118944030 NA coding downstream 192098 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 752148 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 752698 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 1181099 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1824695 4050783 ~ 4065607 (+)
G105700 NA non-coding upstream 2299 2223199 ~ 2223419 (+)
G105694 NA non-coding upstream 11942 2212323 ~ 2213776 (+)
G105683 NA non-coding upstream 34429 2184048 ~ 2191289 (+)
G105673 NA non-coding upstream 62678 2161395 ~ 2163040 (+)
G105672 NA non-coding upstream 64689 2160815 ~ 2161029 (+)
G105704 NA non-coding downstream 1382 2227470 ~ 2227727 (+)
G105738 NA non-coding downstream 6715 2232803 ~ 2233739 (+)
G105740 NA non-coding downstream 7974 2234062 ~ 2235517 (+)
G105750 NA non-coding downstream 20521 2246609 ~ 2246849 (+)
G105752 NA non-coding downstream 22076 2248164 ~ 2248504 (+)
G105042 NA other upstream 515161 1708969 ~ 1710557 (+)
G105036 NA other upstream 525287 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 872855 1309202 ~ 1390936 (+)
G104761 NA other upstream 1071969 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1353203 860459 ~ 872515 (+)
G106019 NA other downstream 294628 2520716 ~ 2527972 (+)
G106122 NA other downstream 491873 2717961 ~ 2718525 (+)
G106240 NA other downstream 748735 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 980709 3006312 ~ 3391033 (+)

Expression



Co-expression Network