Gene
RNA
| Item | Value |
|---|---|
| gene id | G105742 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 2235444 ~ 2235919 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119360 | True | 258 | lncRNA | 0.42 | 3 | 2235444 | 2235919 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nrsn1 | nrsn1 | coding | downstream | 309505 | 1921010 ~ 1925939 (-) |
| zdhhc3a | zdhhc3 | coding | downstream | 503111 | 1709516 ~ 1732333 (-) |
| kiaa1143 | k1143 | coding | downstream | 530581 | 1702951 ~ 1704863 (-) |
| LOC110515405 | LOC106590999 | coding | downstream | 551955 | 1573402 ~ 1683489 (-) |
| LOC110515934 | gadl1 | coding | downstream | 778311 | 1427251 ~ 1457133 (-) |
| LOC118937333 | NA | coding | upstream | 66717 | 2302636 ~ 2303881 (-) |
| LOC118937335 | NA | coding | upstream | 194356 | 2273420 ~ 2440302 (-) |
| sox4b | sox4 | coding | upstream | 210455 | 2446374 ~ 2449761 (-) |
| LOC110512766 | LOC106593784 | coding | upstream | 277791 | 2513710 ~ 2516419 (-) |
| LOC110514306 | NA | coding | upstream | 282268 | 2518187 ~ 2519022 (-) |
| G105737 | NA | non-coding | downstream | 2879 | 2232349 ~ 2232565 (-) |
| G105733 | NA | non-coding | downstream | 9350 | 2225809 ~ 2226094 (-) |
| G105729 | NA | non-coding | downstream | 17219 | 2218017 ~ 2218225 (-) |
| G105722 | NA | non-coding | downstream | 28077 | 2206599 ~ 2207367 (-) |
| G105709 | NA | non-coding | downstream | 64387 | 2170544 ~ 2171057 (-) |
| G105748 | NA | non-coding | upstream | 5238 | 2241157 ~ 2241874 (-) |
| G105749 | NA | non-coding | upstream | 9429 | 2245348 ~ 2245605 (-) |
| G105751 | NA | non-coding | upstream | 10532 | 2246451 ~ 2246707 (-) |
| G105753 | NA | non-coding | upstream | 13533 | 2249452 ~ 2249740 (-) |
| G105754 | NA | non-coding | upstream | 14329 | 2250248 ~ 2251006 (-) |
| G105636 | NA | other | downstream | 114943 | 2118079 ~ 2120501 (-) |
| G105492 | NA | other | downstream | 273857 | 1958484 ~ 1961587 (-) |
| G105428 | NA | other | downstream | 317417 | 1917351 ~ 1918027 (-) |
| G105427 | NA | other | downstream | 318449 | 1912592 ~ 1917188 (-) |
| G105340 | NA | other | downstream | 593712 | 1641267 ~ 1641732 (-) |
| G105938 | NA | other | upstream | 127080 | 2362999 ~ 2363531 (-) |
| G106001 | NA | other | upstream | 247022 | 2482941 ~ 2483356 (-) |
| G106003 | NA | other | upstream | 247941 | 2483860 ~ 2485123 (-) |
| LOC110506994 | carmil1 | other | upstream | 1516642 | 3705036 ~ 3924570 (-) |
| G107456 | NA | other | upstream | 1755407 | 3991326 ~ 3992847 (-) |
