G105750


Basic Information

Item Value
gene id G105750
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2246609 ~ 2246849 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119372
gagagagggagaaggagagagagagaaggagagaacccCTGGGGGGGtacaaacaaaggatccaatagaggaaagtcgtattccaggtcgtaatgctggtgagttaccgccactctgatatccaaaagttatttccggctgtatgtaataacacacacaagAAAAAACGACATACTgaaaagttgcttaggagctggaagcagagctgccacatctgtcggcgccatcttgtctAGATATA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106603472 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119372 True 241 lncRNA 0.47 1 2246609 2246849

Neighbor

gene id symbol gene type direction distance location
LOC118944029 NA coding upstream 68613 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 126154 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 345161 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 393039 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 451671 1745298 ~ 1794938 (+)
LOC118944030 NA coding downstream 171337 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 731387 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 731937 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 1160338 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1803934 4050783 ~ 4065607 (+)
G105740 NA non-coding upstream 11092 2234062 ~ 2235517 (+)
G105738 NA non-coding upstream 12870 2232803 ~ 2233739 (+)
G105704 NA non-coding upstream 18882 2227470 ~ 2227727 (+)
G105702 NA non-coding upstream 20521 2225718 ~ 2226088 (+)
G105700 NA non-coding upstream 23190 2223199 ~ 2223419 (+)
G105752 NA non-coding downstream 1315 2248164 ~ 2248504 (+)
G105757 NA non-coding downstream 7899 2254748 ~ 2255015 (+)
G105760 NA non-coding downstream 9698 2256547 ~ 2256907 (+)
G105762 NA non-coding downstream 10669 2257518 ~ 2257756 (+)
G105770 NA non-coding downstream 24213 2271062 ~ 2271645 (+)
G105042 NA other upstream 536052 1708969 ~ 1710557 (+)
G105036 NA other upstream 546178 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 893746 1309202 ~ 1390936 (+)
G104761 NA other upstream 1092860 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1374094 860459 ~ 872515 (+)
G106019 NA other downstream 273867 2520716 ~ 2527972 (+)
G106122 NA other downstream 471112 2717961 ~ 2718525 (+)
G106240 NA other downstream 727974 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 959948 3006312 ~ 3391033 (+)

Expression


Co-expression Network