G105754



Basic Information


Item Value
gene id G105754
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2250248 ~ 2251006 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU119376
ccatccacccatccacccacccatccatccatccatccaaccatccatccaaccatccatccatccatccatccatccatccatccatccatccatccatccaaccatccatccatccatccatccatccaaccatccatccatccatccatccatccatccatccaaccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccatccaaccatccatccatccatccatccatccatccatccatccatccatccatcca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119376 True 319 lncRNA 0.49 2 2250248 2251006

Neighbor


gene id symbol gene type direction distance location
nrsn1 nrsn1 coding downstream 324309 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 517915 1709516 ~ 1732333 (-)
kiaa1143 k1143 coding downstream 545385 1702951 ~ 1704863 (-)
LOC110515405 LOC106590999 coding downstream 566759 1573402 ~ 1683489 (-)
LOC110515934 gadl1 coding downstream 793115 1427251 ~ 1457133 (-)
LOC118937333 NA coding upstream 51630 2302636 ~ 2303881 (-)
LOC118937335 NA coding upstream 179269 2273420 ~ 2440302 (-)
sox4b sox4 coding upstream 195368 2446374 ~ 2449761 (-)
LOC110512766 LOC106593784 coding upstream 262704 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 267181 2518187 ~ 2519022 (-)
G105753 NA non-coding downstream 508 2249452 ~ 2249740 (-)
G105751 NA non-coding downstream 3541 2246451 ~ 2246707 (-)
G105749 NA non-coding downstream 4643 2245348 ~ 2245605 (-)
G105748 NA non-coding downstream 8374 2241157 ~ 2241874 (-)
G105742 NA non-coding downstream 14329 2235444 ~ 2235919 (-)
G105759 NA non-coding upstream 5203 2256209 ~ 2256412 (-)
G105763 NA non-coding upstream 6495 2257501 ~ 2257717 (-)
G105768 NA non-coding upstream 9312 2260318 ~ 2260574 (-)
G105769 NA non-coding upstream 19615 2270621 ~ 2271002 (-)
G105636 NA other downstream 129747 2118079 ~ 2120501 (-)
G105492 NA other downstream 288661 1958484 ~ 1961587 (-)
G105428 NA other downstream 332221 1917351 ~ 1918027 (-)
G105427 NA other downstream 333253 1912592 ~ 1917188 (-)
G105340 NA other downstream 608516 1641267 ~ 1641732 (-)
G105938 NA other upstream 111993 2362999 ~ 2363531 (-)
G106001 NA other upstream 231935 2482941 ~ 2483356 (-)
G106003 NA other upstream 232854 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1501555 3705036 ~ 3924570 (-)
G107456 NA other upstream 1740320 3991326 ~ 3992847 (-)

Expression



Co-expression Network