G105769



Basic Information


Item Value
gene id G105769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2270621 ~ 2271002 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU119391
cgTTCTTCAACCTTATACCCAACCTACTGACCCCGTCCTTCAaccctataccaacctactgaccccgTTCTTCAACCttataccaacctactgaccccgtccctcaaccctataccaacctactgaccccgtccttcaaccctataccaacctactgaccccgtccttcaaccctataccaacctactgaccccgtcctacaaccctataccaacctactgaccccgtccttcaaccctataccaacctactgaccccatccttcaaccctataccaacctactgaccccgtccttcaaccctataccaacctactgaccccgtccttcaaccctataccaacctactgaccccgtccttcaaccctataccaacctactga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119391 True 382 lncRNA 0.50 1 2270621 2271002

Neighbor


gene id symbol gene type direction distance location
nrsn1 nrsn1 coding downstream 344682 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 538288 1709516 ~ 1732333 (-)
kiaa1143 k1143 coding downstream 565758 1702951 ~ 1704863 (-)
LOC110515405 LOC106590999 coding downstream 587132 1573402 ~ 1683489 (-)
LOC110515934 gadl1 coding downstream 813488 1427251 ~ 1457133 (-)
LOC118937333 NA coding upstream 31634 2302636 ~ 2303881 (-)
LOC118937335 NA coding upstream 159273 2273420 ~ 2440302 (-)
sox4b sox4 coding upstream 175372 2446374 ~ 2449761 (-)
LOC110512766 LOC106593784 coding upstream 242708 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 247185 2518187 ~ 2519022 (-)
G105768 NA non-coding downstream 10047 2260318 ~ 2260574 (-)
G105763 NA non-coding downstream 12904 2257501 ~ 2257717 (-)
G105759 NA non-coding downstream 14209 2256209 ~ 2256412 (-)
G105754 NA non-coding downstream 19615 2250248 ~ 2251006 (-)
G105753 NA non-coding downstream 20881 2249452 ~ 2249740 (-)
G105895 NA non-coding upstream 3678 2274680 ~ 2275313 (-)
G105905 NA non-coding upstream 19512 2290514 ~ 2290834 (-)
G105911 NA non-coding upstream 38635 2309637 ~ 2310159 (-)
G105913 NA non-coding upstream 40499 2311501 ~ 2313518 (-)
G105636 NA other downstream 150120 2118079 ~ 2120501 (-)
G105492 NA other downstream 309034 1958484 ~ 1961587 (-)
G105428 NA other downstream 352594 1917351 ~ 1918027 (-)
G105427 NA other downstream 353626 1912592 ~ 1917188 (-)
G105340 NA other downstream 628889 1641267 ~ 1641732 (-)
G105938 NA other upstream 91997 2362999 ~ 2363531 (-)
G106001 NA other upstream 211939 2482941 ~ 2483356 (-)
G106003 NA other upstream 212858 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1481559 3705036 ~ 3924570 (-)
G107456 NA other upstream 1720324 3991326 ~ 3992847 (-)

Expression



Co-expression Network