G105770


Basic Information

Item Value
gene id G105770
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2271062 ~ 2271645 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119392
ggtggggtcagtaggttggtataaggttgaaggacggggtcagtaggttggtatagggttgaaggacggggtcagtaggttggtataaggttgaaggacggggtcagtaggttggtatagggttgaaggatggggtcagtaggttggtatagggttgaaggacggggtcagtaggttggtatagggtTGTAGGGTggggtcagtaggttggtataaggttgaaggacggggtcagtaggttggtatagggttgaaggacggggtcagtaggttggtatagggttgaaggacggggtcagtaggttggtatagggttgaaggacggggtcagtaggttggtatagggtTGTAGGGTGGGGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119392 True 361 lncRNA 0.39 3 2271062 2271645

Neighbor

gene id symbol gene type direction distance location
LOC118944029 NA coding upstream 93066 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 150607 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 369614 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 417492 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 476124 1745298 ~ 1794938 (+)
LOC118944030 NA coding downstream 146541 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 706591 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 707141 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 1135542 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1779138 4050783 ~ 4065607 (+)
G105762 NA non-coding upstream 13306 2257518 ~ 2257756 (+)
G105760 NA non-coding upstream 14155 2256547 ~ 2256907 (+)
G105757 NA non-coding upstream 16047 2254748 ~ 2255015 (+)
G105752 NA non-coding upstream 22558 2248164 ~ 2248504 (+)
G105750 NA non-coding upstream 24213 2246609 ~ 2246849 (+)
G105792 NA non-coding downstream 37019 2308664 ~ 2310148 (+)
G105794 NA non-coding downstream 38984 2310629 ~ 2311097 (+)
G105803 NA non-coding downstream 59758 2331403 ~ 2333175 (+)
G105804 NA non-coding downstream 62179 2333824 ~ 2334341 (+)
G105806 NA non-coding downstream 64403 2336048 ~ 2336506 (+)
G105042 NA other upstream 560505 1708969 ~ 1710557 (+)
G105036 NA other upstream 570631 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 918199 1309202 ~ 1390936 (+)
G104761 NA other upstream 1117313 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1398547 860459 ~ 872515 (+)
G106019 NA other downstream 249071 2520716 ~ 2527972 (+)
G106122 NA other downstream 446316 2717961 ~ 2718525 (+)
G106240 NA other downstream 703178 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 935152 3006312 ~ 3391033 (+)

Expression


Co-expression Network