Gene
RNA
| Item | Value |
|---|---|
| gene id | G105895 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 2274680 ~ 2275313 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119555 | True | 364 | lncRNA | 0.45 | 2 | 2274680 | 2275313 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nrsn1 | nrsn1 | coding | downstream | 348741 | 1921010 ~ 1925939 (-) |
| zdhhc3a | zdhhc3 | coding | downstream | 542347 | 1709516 ~ 1732333 (-) |
| kiaa1143 | k1143 | coding | downstream | 569817 | 1702951 ~ 1704863 (-) |
| LOC110515405 | LOC106590999 | coding | downstream | 591191 | 1573402 ~ 1683489 (-) |
| LOC110515934 | gadl1 | coding | downstream | 817547 | 1427251 ~ 1457133 (-) |
| LOC118937333 | NA | coding | upstream | 27323 | 2302636 ~ 2303881 (-) |
| LOC118937335 | NA | coding | upstream | 154962 | 2273420 ~ 2440302 (-) |
| sox4b | sox4 | coding | upstream | 171061 | 2446374 ~ 2449761 (-) |
| LOC110512766 | LOC106593784 | coding | upstream | 238397 | 2513710 ~ 2516419 (-) |
| LOC110514306 | NA | coding | upstream | 242874 | 2518187 ~ 2519022 (-) |
| G105769 | NA | non-coding | downstream | 3678 | 2270621 ~ 2271002 (-) |
| G105768 | NA | non-coding | downstream | 14106 | 2260318 ~ 2260574 (-) |
| G105763 | NA | non-coding | downstream | 16963 | 2257501 ~ 2257717 (-) |
| G105759 | NA | non-coding | downstream | 18268 | 2256209 ~ 2256412 (-) |
| G105754 | NA | non-coding | downstream | 23674 | 2250248 ~ 2251006 (-) |
| G105905 | NA | non-coding | upstream | 15201 | 2290514 ~ 2290834 (-) |
| G105911 | NA | non-coding | upstream | 34324 | 2309637 ~ 2310159 (-) |
| G105913 | NA | non-coding | upstream | 36188 | 2311501 ~ 2313518 (-) |
| G105936 | NA | non-coding | upstream | 79664 | 2354977 ~ 2355225 (-) |
| G105945 | NA | non-coding | upstream | 100047 | 2375360 ~ 2376248 (-) |
| G105636 | NA | other | downstream | 154179 | 2118079 ~ 2120501 (-) |
| G105492 | NA | other | downstream | 313093 | 1958484 ~ 1961587 (-) |
| G105428 | NA | other | downstream | 356653 | 1917351 ~ 1918027 (-) |
| G105427 | NA | other | downstream | 357685 | 1912592 ~ 1917188 (-) |
| G105340 | NA | other | downstream | 632948 | 1641267 ~ 1641732 (-) |
| G105938 | NA | other | upstream | 87686 | 2362999 ~ 2363531 (-) |
| G106001 | NA | other | upstream | 207628 | 2482941 ~ 2483356 (-) |
| G106003 | NA | other | upstream | 208547 | 2483860 ~ 2485123 (-) |
| LOC110506994 | carmil1 | other | upstream | 1477248 | 3705036 ~ 3924570 (-) |
| G107456 | NA | other | upstream | 1716013 | 3991326 ~ 3992847 (-) |
