G105913


Basic Information

Item Value
gene id G105913
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2311501 ~ 2313518 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119577
ACCTACTCTTcgtcagaggaggaggaagaccgttACAAACACTCGTCCACTGGCCGCTAGGTCTATAGAAATGTGTCTGTTTGAAATGTGTCTGCTTGTTGATATGAAATTACAAGCCATAAAATGTATTGCAGCATCTCTCCAAATGAAGATAAACTGTTGACAGCACAATCTGTACTATTGTTCTTTTAAAAACGTATATGCTGTCACTGTACTGTGACGAATCAGCCATTCCAGCCCTGGTTGAGAGGTGTGCAGCCGTACATATCAGGAGTAATATCTATTCACTACTTCCTGGTTGTAAAGAGACCATGCTATAGACGTTCCCATATCTATTCACTACTTCCTGTTTGTAAAGAGGCCATGCTATAGATGTTCCCATATCTCTACACTACTTCCTGGTTGTAAAGAGGCCATGCTATAGATGTTCCCATATCTATTCACTACTTCCTGATTGTAAAGAGGCCATGCTATAGATGTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAGGCCATGCTATAGATGTTCCCATATCTCTTCACTACTTCCTGATTGTAAAGAGGCCATGCTATAGATGTTCAACTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAAGCCATGCTATAGATGTTCAACTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAAGCCATGCTATAGATGTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAAGCCATGCTATAGATGTTCAACTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAGGCCATGCTATAGATGTTCAACTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAGGCCATGCTATAGATGTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAGGCCATGCTATAGATGTTCCCATATCTCTTCCCTACTTCCTGATTGTAAAGAGGCCATGCTATAGATGTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAGGCCATGCTATAGATGTTCAACTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAGGCAATGCTATAGATGTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAGGCAATGCTATAGATGTTCCCATATCTCTTCACTACTTCCTGGTTGTAAAGAGGCCATGCTATAGATGTTTCCACATGAATTATTCTTATTATACATGTTTCCATCTTCCCGCTGCTACTCTCTTCCACTTTCAATAACGCTAAAGAATAAAACATAACAACTCACGTCAGgagatgtattttatttattgtaCTGCAGGTTTAGAATGACTATTTTATGGACACTAGACGATACCCATacacaagaggagaggagaggagtggagggaagAGATGAGgatgggaagagaggagaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119577 True 1416 lncRNA 0.41 4 2311501 2313518

Neighbor

gene id symbol gene type direction distance location
LOC118937333 NA coding downstream 7620 2302636 ~ 2303881 (-)
nrsn1 nrsn1 coding downstream 385562 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 579168 1709516 ~ 1732333 (-)
kiaa1143 k1143 coding downstream 606638 1702951 ~ 1704863 (-)
LOC110515405 LOC106590999 coding downstream 628012 1573402 ~ 1683489 (-)
LOC118937335 NA coding upstream 116757 2273420 ~ 2440302 (-)
sox4b sox4 coding upstream 132856 2446374 ~ 2449761 (-)
LOC110512766 LOC106593784 coding upstream 200192 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 204669 2518187 ~ 2519022 (-)
LOC110511524 NA coding upstream 220284 2533802 ~ 2536162 (-)
G105911 NA non-coding downstream 1342 2309637 ~ 2310159 (-)
G105905 NA non-coding downstream 20667 2290514 ~ 2290834 (-)
G105895 NA non-coding downstream 36188 2274680 ~ 2275313 (-)
G105769 NA non-coding downstream 40499 2270621 ~ 2271002 (-)
G105768 NA non-coding downstream 50927 2260318 ~ 2260574 (-)
G105936 NA non-coding upstream 41459 2354977 ~ 2355225 (-)
G105945 NA non-coding upstream 61842 2375360 ~ 2376248 (-)
G105951 NA non-coding upstream 72077 2385595 ~ 2386717 (-)
G105955 NA non-coding upstream 87932 2401450 ~ 2402497 (-)
G105959 NA non-coding upstream 92501 2406019 ~ 2406549 (-)
G105636 NA other downstream 191000 2118079 ~ 2120501 (-)
G105492 NA other downstream 349914 1958484 ~ 1961587 (-)
G105428 NA other downstream 393474 1917351 ~ 1918027 (-)
G105427 NA other downstream 394506 1912592 ~ 1917188 (-)
G105340 NA other downstream 669769 1641267 ~ 1641732 (-)
G105938 NA other upstream 49481 2362999 ~ 2363531 (-)
G106001 NA other upstream 169423 2482941 ~ 2483356 (-)
G106003 NA other upstream 170342 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1439043 3705036 ~ 3924570 (-)
G107456 NA other upstream 1677808 3991326 ~ 3992847 (-)

Expression


Co-expression Network