G105822


Basic Information

Item Value
gene id G105822
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2362856 ~ 2363663 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119456
AAAACACAATCTCAGATTATTCTGTTTTCTTTTTACAACAGACTAAAACCACTTCAGTTGGAATAGGCCATGGTGATTTAGATGTGACCTGAATGCTGCAGTTCAACATAGTACCTTGTAGTCTACAGTTTAATATAGTACCATGTAGTCTATAGTTCAACATAGAACCATGTAGTCTATAGTTCAACATAGTACCATGTAGTCTACAGTTCAACATAGTACCATGTAGTCTATAGTTCAACATAGTACCATGTAGTCTATAGTTCAACATAGTACCATGTAGTCTATAGTTCAATATAGTACCATGTAGTCTACAGTTCAACATAGTACCATATAGTCTATAGTTCAACATAGTACCATGTAGTCTACAGTTCAACATAGTACCTTGTAGTCTACAGTTCAACATAGTACCATGTAGTCTATAGTTCATCATAGTACCATGTAGTCTATAGTTCAACATAGTACCTTGTAGTCTACAGTTCATCATAGTACCATGTAGTCTATAGTTCAACATAGTACCATGTAGTCTATAGTTCAACATAGTACCATGTAGTCTACAGTTCAACATAGTGCCATGTAGTCTACAGTTTAACATAGTACCTTGTAGTCTACAGTTCAACATATAGTCTACAGTTCAACATAGTACCATGTAGTCTACAGTTCAACATAGTAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC109138918

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119456 True 673 lncRNA 0.42 2 2362856 2363663

Neighbor

gene id symbol gene type direction distance location
LOC118944029 NA coding upstream 184860 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 242401 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 461408 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 509286 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 567918 1745298 ~ 1794938 (+)
LOC118944030 NA coding downstream 54523 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 614573 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 615123 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 1043524 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1687120 4050783 ~ 4065607 (+)
G105806 NA non-coding upstream 26350 2336048 ~ 2336506 (+)
G105804 NA non-coding upstream 28515 2333824 ~ 2334341 (+)
G105803 NA non-coding upstream 29681 2331403 ~ 2333175 (+)
G105794 NA non-coding upstream 51759 2310629 ~ 2311097 (+)
G105792 NA non-coding upstream 52708 2308664 ~ 2310148 (+)
G105824 NA non-coding downstream 1130 2364793 ~ 2365507 (+)
G105837 NA non-coding downstream 17682 2381345 ~ 2382047 (+)
G105839 NA non-coding downstream 21328 2384991 ~ 2385370 (+)
G105847 NA non-coding downstream 29819 2393482 ~ 2395688 (+)
G105853 NA non-coding downstream 45854 2409517 ~ 2410453 (+)
G105042 NA other upstream 652299 1708969 ~ 1710557 (+)
G105036 NA other upstream 662425 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1009993 1309202 ~ 1390936 (+)
G104761 NA other upstream 1209107 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1490341 860459 ~ 872515 (+)
G106019 NA other downstream 157053 2520716 ~ 2527972 (+)
G106122 NA other downstream 354298 2717961 ~ 2718525 (+)
G106240 NA other downstream 611160 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 843134 3006312 ~ 3391033 (+)

Expression


Co-expression Network