Gene
RNA
| Item | Value |
|---|---|
| gene id | G105951 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 2385595 ~ 2386717 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119632 | False | 278 | lncRNA | 0.51 | 3 | 2385595 | 2386717 |
| TU119633 | True | 268 | lncRNA | 0.44 | 2 | 2385595 | 2385893 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937333 | NA | coding | downstream | 81714 | 2302636 ~ 2303881 (-) |
| nrsn1 | nrsn1 | coding | downstream | 459656 | 1921010 ~ 1925939 (-) |
| zdhhc3a | zdhhc3 | coding | downstream | 653262 | 1709516 ~ 1732333 (-) |
| kiaa1143 | k1143 | coding | downstream | 680732 | 1702951 ~ 1704863 (-) |
| LOC110515405 | LOC106590999 | coding | downstream | 702106 | 1573402 ~ 1683489 (-) |
| LOC118937335 | NA | coding | upstream | 43558 | 2273420 ~ 2440302 (-) |
| sox4b | sox4 | coding | upstream | 59657 | 2446374 ~ 2449761 (-) |
| LOC110512766 | LOC106593784 | coding | upstream | 126993 | 2513710 ~ 2516419 (-) |
| LOC110514306 | NA | coding | upstream | 131470 | 2518187 ~ 2519022 (-) |
| LOC110511524 | NA | coding | upstream | 147085 | 2533802 ~ 2536162 (-) |
| G105945 | NA | non-coding | downstream | 9347 | 2375360 ~ 2376248 (-) |
| G105936 | NA | non-coding | downstream | 30370 | 2354977 ~ 2355225 (-) |
| G105913 | NA | non-coding | downstream | 72077 | 2311501 ~ 2313518 (-) |
| G105911 | NA | non-coding | downstream | 75436 | 2309637 ~ 2310159 (-) |
| G105905 | NA | non-coding | downstream | 94761 | 2290514 ~ 2290834 (-) |
| G105955 | NA | non-coding | upstream | 14733 | 2401450 ~ 2402497 (-) |
| G105959 | NA | non-coding | upstream | 19302 | 2406019 ~ 2406549 (-) |
| G105964 | NA | non-coding | upstream | 26806 | 2413523 ~ 2414109 (-) |
| G105988 | NA | non-coding | upstream | 76094 | 2462811 ~ 2463049 (-) |
| G105990 | NA | non-coding | upstream | 77646 | 2464363 ~ 2464637 (-) |
| G105938 | NA | other | downstream | 22064 | 2362999 ~ 2363531 (-) |
| G105636 | NA | other | downstream | 265094 | 2118079 ~ 2120501 (-) |
| G105492 | NA | other | downstream | 424008 | 1958484 ~ 1961587 (-) |
| G105428 | NA | other | downstream | 467568 | 1917351 ~ 1918027 (-) |
| G105427 | NA | other | downstream | 468600 | 1912592 ~ 1917188 (-) |
| G106001 | NA | other | upstream | 96224 | 2482941 ~ 2483356 (-) |
| G106003 | NA | other | upstream | 97143 | 2483860 ~ 2485123 (-) |
| LOC110506994 | carmil1 | other | upstream | 1365844 | 3705036 ~ 3924570 (-) |
| G107456 | NA | other | upstream | 1604609 | 3991326 ~ 3992847 (-) |
| G107574 | NA | other | upstream | 1908708 | 4295425 ~ 4296815 (-) |
