G105955


Basic Information

Item Value
gene id G105955
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2401450 ~ 2402497 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119644
GACTGTAACCTACTGTGATCTATGTTGTGAGACTGTAACCTACTGTGATCTCTGTTGTTATGAGACTGTGACCTACTGTGATCTCTGTTGTGAGACTGTAACCTACTGTGATCTCTGTTGTGAGACTGTAACCTAATGTGATCGCTGTTGTGAGACTGTGACCTACTGTGATCTCTGTTATGAGACTGTAACCTACTGTGATCTCTGTTGTGAGACTGTAACCTACTGTGATCTCTGTTATGAGACTGTAACCTACTGTGATCTCTGTTGTGAGACTGTAACCTACTGTGAGGCATAACAGTACTATAGTATAGAGGCatcacagtactacagtatagaggcatcacagtactacagtatagaggcatcacagtactacagtatagaggcatcacagtactacagtatagagGCATCACAGCatcacagtactacagtatagtaGAGGCATCACAGTACTGCAGTACTTCCTTCCTACACCTTAATAAAGCAAGGCCATCCCAGCACCCTGTGACCTGCCTGGCAGCATCAGTTGAGATTCTCACACCTCTACTGGTGTCTGTTGATAAGAGTAGCGACAGCCTGCCCCCCGAGCCCTTCTGAGACCCTTATAGAGTATCtggcaggctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106592766 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119644 True 683 lncRNA 0.46 3 2401450 2402497

Neighbor

gene id symbol gene type direction distance location
LOC118937333 NA coding downstream 97569 2302636 ~ 2303881 (-)
nrsn1 nrsn1 coding downstream 475511 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 669117 1709516 ~ 1732333 (-)
kiaa1143 k1143 coding downstream 696587 1702951 ~ 1704863 (-)
LOC110515405 LOC106590999 coding downstream 717961 1573402 ~ 1683489 (-)
LOC118937335 NA coding upstream 27778 2273420 ~ 2440302 (-)
sox4b sox4 coding upstream 43877 2446374 ~ 2449761 (-)
LOC110512766 LOC106593784 coding upstream 111213 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 115690 2518187 ~ 2519022 (-)
LOC110511524 NA coding upstream 131305 2533802 ~ 2536162 (-)
G105951 NA non-coding downstream 14733 2385595 ~ 2386717 (-)
G105945 NA non-coding downstream 25202 2375360 ~ 2376248 (-)
G105936 NA non-coding downstream 46225 2354977 ~ 2355225 (-)
G105913 NA non-coding downstream 87932 2311501 ~ 2313518 (-)
G105911 NA non-coding downstream 91291 2309637 ~ 2310159 (-)
G105959 NA non-coding upstream 3522 2406019 ~ 2406549 (-)
G105964 NA non-coding upstream 11026 2413523 ~ 2414109 (-)
G105988 NA non-coding upstream 60314 2462811 ~ 2463049 (-)
G105990 NA non-coding upstream 61866 2464363 ~ 2464637 (-)
G105992 NA non-coding upstream 67076 2469573 ~ 2470510 (-)
G105938 NA other downstream 37919 2362999 ~ 2363531 (-)
G105636 NA other downstream 280949 2118079 ~ 2120501 (-)
G105492 NA other downstream 439863 1958484 ~ 1961587 (-)
G105428 NA other downstream 483423 1917351 ~ 1918027 (-)
G105427 NA other downstream 484455 1912592 ~ 1917188 (-)
G106001 NA other upstream 80444 2482941 ~ 2483356 (-)
G106003 NA other upstream 81363 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1350064 3705036 ~ 3924570 (-)
G107456 NA other upstream 1588829 3991326 ~ 3992847 (-)
G107574 NA other upstream 1892928 4295425 ~ 4296815 (-)

Expression


Co-expression Network