Gene
RNA
| Item | Value |
|---|---|
| gene id | G105990 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 2464363 ~ 2464637 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119694 | True | 275 | lncRNA | 0.41 | 1 | 2464363 | 2464637 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sox4b | sox4 | coding | downstream | 14602 | 2446374 ~ 2449761 (-) |
| LOC118937335 | NA | coding | downstream | 24061 | 2273420 ~ 2440302 (-) |
| LOC118937333 | NA | coding | downstream | 160482 | 2302636 ~ 2303881 (-) |
| nrsn1 | nrsn1 | coding | downstream | 538424 | 1921010 ~ 1925939 (-) |
| zdhhc3a | zdhhc3 | coding | downstream | 732030 | 1709516 ~ 1732333 (-) |
| LOC110512766 | LOC106593784 | coding | upstream | 49073 | 2513710 ~ 2516419 (-) |
| LOC110514306 | NA | coding | upstream | 53550 | 2518187 ~ 2519022 (-) |
| LOC110511524 | NA | coding | upstream | 69165 | 2533802 ~ 2536162 (-) |
| cdkal1 | cdkal | coding | upstream | 180253 | 2644890 ~ 3391012 (-) |
| LOC118937342 | e2f3 | coding | upstream | 928009 | 3392063 ~ 3405112 (-) |
| G105988 | NA | non-coding | downstream | 1314 | 2462811 ~ 2463049 (-) |
| G105964 | NA | non-coding | downstream | 50254 | 2413523 ~ 2414109 (-) |
| G105959 | NA | non-coding | downstream | 57814 | 2406019 ~ 2406549 (-) |
| G105955 | NA | non-coding | downstream | 61866 | 2401450 ~ 2402497 (-) |
| G105992 | NA | non-coding | upstream | 4936 | 2469573 ~ 2470510 (-) |
| G105994 | NA | non-coding | upstream | 8557 | 2473194 ~ 2474519 (-) |
| G105995 | NA | non-coding | upstream | 10055 | 2474692 ~ 2475026 (-) |
| G105996 | NA | non-coding | upstream | 10733 | 2475370 ~ 2477550 (-) |
| G105997 | NA | non-coding | upstream | 14559 | 2479196 ~ 2480550 (-) |
| G105938 | NA | other | downstream | 100832 | 2362999 ~ 2363531 (-) |
| G105636 | NA | other | downstream | 343862 | 2118079 ~ 2120501 (-) |
| G105492 | NA | other | downstream | 502776 | 1958484 ~ 1961587 (-) |
| G105428 | NA | other | downstream | 546336 | 1917351 ~ 1918027 (-) |
| G105427 | NA | other | downstream | 547368 | 1912592 ~ 1917188 (-) |
| G106001 | NA | other | upstream | 18304 | 2482941 ~ 2483356 (-) |
| G106003 | NA | other | upstream | 19223 | 2483860 ~ 2485123 (-) |
| LOC110506994 | carmil1 | other | upstream | 1287924 | 3705036 ~ 3924570 (-) |
| G107456 | NA | other | upstream | 1526689 | 3991326 ~ 3992847 (-) |
| G107574 | NA | other | upstream | 1830788 | 4295425 ~ 4296815 (-) |
