G106000



Basic Information


Item Value
gene id G106000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2482269 ~ 2482478 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU119709
ggtttattatggatccccattagttcctgtcaaggcagccagctactcttcctggggtttattatggatccccattagttcctgccaaggcagcagctactcttcctggggtttattatggatccccattagttcctgtcaagacagcagctactcttcctggtgtttattatggatccccattagttcctgccaagacagcagctactc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119709 True 210 lncRNA 0.33 1 2482269 2482478

Neighbor


gene id symbol gene type direction distance location
sox4b sox4 coding downstream 32508 2446374 ~ 2449761 (-)
LOC118937335 NA coding downstream 41967 2273420 ~ 2440302 (-)
LOC118937333 NA coding downstream 178388 2302636 ~ 2303881 (-)
nrsn1 nrsn1 coding downstream 556330 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 749936 1709516 ~ 1732333 (-)
LOC110512766 LOC106593784 coding upstream 31232 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 35709 2518187 ~ 2519022 (-)
LOC110511524 NA coding upstream 51324 2533802 ~ 2536162 (-)
cdkal1 cdkal coding upstream 162412 2644890 ~ 3391012 (-)
LOC118937342 e2f3 coding upstream 910168 3392063 ~ 3405112 (-)
G105997 NA non-coding downstream 1719 2479196 ~ 2480550 (-)
G105996 NA non-coding downstream 4719 2475370 ~ 2477550 (-)
G105995 NA non-coding downstream 7243 2474692 ~ 2475026 (-)
G105994 NA non-coding downstream 7750 2473194 ~ 2474519 (-)
G105992 NA non-coding downstream 11759 2469573 ~ 2470510 (-)
G106005 NA non-coding upstream 2720 2485198 ~ 2485622 (-)
G106043 NA non-coding upstream 70382 2552860 ~ 2553853 (-)
G106044 NA non-coding upstream 71519 2553997 ~ 2554368 (-)
G106047 NA non-coding upstream 73028 2555506 ~ 2555721 (-)
G106048 NA non-coding upstream 74466 2556944 ~ 2557296 (-)
G105938 NA other downstream 118738 2362999 ~ 2363531 (-)
G105636 NA other downstream 361768 2118079 ~ 2120501 (-)
G105492 NA other downstream 520682 1958484 ~ 1961587 (-)
G105428 NA other downstream 564242 1917351 ~ 1918027 (-)
G105427 NA other downstream 565274 1912592 ~ 1917188 (-)
G106001 NA other upstream 463 2482941 ~ 2483356 (-)
G106003 NA other upstream 1382 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1270083 3705036 ~ 3924570 (-)
G107456 NA other upstream 1508848 3991326 ~ 3992847 (-)
G107574 NA other upstream 1812947 4295425 ~ 4296815 (-)

Expression



Co-expression Network