G106001



Basic Information


Item Value
gene id G106001
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2482941 ~ 2483356 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU119710
cacttcctggggtttattatggatccccatttgttcctgccaaggcagcagctactcttcctggggtttattatggatccccatttagttcctgccaaggcagcagctactcttcctggggtttattatggatccccatttagttcctgccaaggcagcagctactcttcctggggtttattacggatccccattagttcctgccaaggcagcagctactcttcctggggtttattatggatccccattagttcctgtcaagacagcagctacacttcctggggtttattatggatccccattagttcctgtcaagacagcagctacacttcctggggtttattatggatccccattagttcctgtcaagacagcagctacacttcctggggtttattgtggatccccattagttc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119710 True 416 TUCP 0.44 1 2482941 2483356

Neighbor


gene id symbol gene type direction distance location
sox4b sox4 coding downstream 33180 2446374 ~ 2449761 (-)
LOC118937335 NA coding downstream 42639 2273420 ~ 2440302 (-)
LOC118937333 NA coding downstream 179060 2302636 ~ 2303881 (-)
nrsn1 nrsn1 coding downstream 557002 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 750608 1709516 ~ 1732333 (-)
LOC110512766 LOC106593784 coding upstream 30354 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 34831 2518187 ~ 2519022 (-)
LOC110511524 NA coding upstream 50446 2533802 ~ 2536162 (-)
cdkal1 cdkal coding upstream 161534 2644890 ~ 3391012 (-)
LOC118937342 e2f3 coding upstream 909290 3392063 ~ 3405112 (-)
G106000 NA non-coding downstream 463 2482269 ~ 2482478 (-)
G105997 NA non-coding downstream 2391 2479196 ~ 2480550 (-)
G105996 NA non-coding downstream 5391 2475370 ~ 2477550 (-)
G105995 NA non-coding downstream 7915 2474692 ~ 2475026 (-)
G105994 NA non-coding downstream 8422 2473194 ~ 2474519 (-)
G106005 NA non-coding upstream 1842 2485198 ~ 2485622 (-)
G106043 NA non-coding upstream 69504 2552860 ~ 2553853 (-)
G106044 NA non-coding upstream 70641 2553997 ~ 2554368 (-)
G106047 NA non-coding upstream 72150 2555506 ~ 2555721 (-)
G106048 NA non-coding upstream 73588 2556944 ~ 2557296 (-)
G105938 NA other downstream 119410 2362999 ~ 2363531 (-)
G105636 NA other downstream 362440 2118079 ~ 2120501 (-)
G105492 NA other downstream 521354 1958484 ~ 1961587 (-)
G105428 NA other downstream 564914 1917351 ~ 1918027 (-)
G105427 NA other downstream 565946 1912592 ~ 1917188 (-)
G106003 NA other upstream 504 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1269205 3705036 ~ 3924570 (-)
G107456 NA other upstream 1507970 3991326 ~ 3992847 (-)
G107574 NA other upstream 1812069 4295425 ~ 4296815 (-)
G107576 NA other upstream 1814089 4297445 ~ 4302456 (-)

Expression



Co-expression Network