G106003


Basic Information

Item Value
gene id G106003
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2483860 ~ 2485123 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119712
CATAACAAGACGTTgctttagttttttttgttttgtgtttgtttgtcaataaGGGTgcgcagggtgaatatgtggtctgtcgtacgataTTTTGATAAGAaggcaatttgacatttgctcaggtcattttgttttcactgaggaaactGAGGAAGCTGTTGATGACAGAGGACCTTTCAGAGATGGCTGCTGACGCGTATTtttttggggtcaaatttgtctccatttttGTGGATTGGGATGATCAGGCCTTGGATTCCAAAATAttagggaagatgccagagctgagaaTAATGTTGAAGAGTTTAAGAATAACCCATTTGAATTGGTTATATTTGatcattttgttcagtatatcatctggggttgggggggtgggggggggggggggatgctgtcacctccaggtaggtgtttgtccccctgtgtgctgagggtgtcaggttcttgtccagtacTGGCATTTAAGTCACCACAGGCTAGTACATTTCTATGGACCTGGAAATGATAGATTTCCCTCTCCAAGATGGAAAAGCTGTCATCGTTATAGTATGGGGGatctactgggggggggggggtctaggtagcaatattttttattttgaatatcTTTCCAGGTGTAAAATGTTCCGGTTTTGAATAATTTcatagagtgagttaggtctgctctacaccaaattagcataccccctgagtccattccctgtttcacacctggtaatTTGGTGGaggggactaccagctctctgtaacctagagggcaaccagtgtgtccgtctcctccatctcctttataccataaataccatgtttcaatctctctctctctctctctctctttctcactctcactctgtctgtctctctctctctcacaatttatttgactgtctctctccctctctctctctaactcctctctctctctctctcactccgagGGAGAAGACTCATCATCTTGATATACAGTATCAAACAAGTGTACAGTATCATCCCccagcagcagctacacttcctggagtttattatggatccccattagttcctgccaaggcagcagctactcttcctggggtttattatggatccccatttgttcctgccaaggcagcagctactcttcctggggtttattatggatccccatttagttcctgccaaggcagcagctactcttcctggggtttattacggatccccattagttcctgccaaggcagcagctactcttcctggggtttattatggatccccattagttcct

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119712 True 1264 TUCP 0.45 1 2483860 2485123

Neighbor

gene id symbol gene type direction distance location
sox4b sox4 coding downstream 34099 2446374 ~ 2449761 (-)
LOC118937335 NA coding downstream 43558 2273420 ~ 2440302 (-)
LOC118937333 NA coding downstream 179979 2302636 ~ 2303881 (-)
nrsn1 nrsn1 coding downstream 557921 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 751527 1709516 ~ 1732333 (-)
LOC110512766 LOC106593784 coding upstream 28587 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 33064 2518187 ~ 2519022 (-)
LOC110511524 NA coding upstream 48679 2533802 ~ 2536162 (-)
cdkal1 cdkal coding upstream 159767 2644890 ~ 3391012 (-)
LOC118937342 e2f3 coding upstream 907523 3392063 ~ 3405112 (-)
G106000 NA non-coding downstream 1382 2482269 ~ 2482478 (-)
G105997 NA non-coding downstream 3310 2479196 ~ 2480550 (-)
G105996 NA non-coding downstream 6310 2475370 ~ 2477550 (-)
G105995 NA non-coding downstream 8834 2474692 ~ 2475026 (-)
G105994 NA non-coding downstream 9341 2473194 ~ 2474519 (-)
G106005 NA non-coding upstream 75 2485198 ~ 2485622 (-)
G106043 NA non-coding upstream 67737 2552860 ~ 2553853 (-)
G106044 NA non-coding upstream 68874 2553997 ~ 2554368 (-)
G106047 NA non-coding upstream 70383 2555506 ~ 2555721 (-)
G106048 NA non-coding upstream 71821 2556944 ~ 2557296 (-)
G106001 NA other downstream 504 2482941 ~ 2483356 (-)
G105938 NA other downstream 120329 2362999 ~ 2363531 (-)
G105636 NA other downstream 363359 2118079 ~ 2120501 (-)
G105492 NA other downstream 522273 1958484 ~ 1961587 (-)
G105428 NA other downstream 565833 1917351 ~ 1918027 (-)
LOC110506994 carmil1 other upstream 1267438 3705036 ~ 3924570 (-)
G107456 NA other upstream 1506203 3991326 ~ 3992847 (-)
G107574 NA other upstream 1810302 4295425 ~ 4296815 (-)
G107576 NA other upstream 1812322 4297445 ~ 4302456 (-)
G107755 NA other upstream 1890799 4375922 ~ 4376423 (-)

Expression


Co-expression Network