G106004


Basic Information

Item Value
gene id G106004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2485197 ~ 2485617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119713
gcatatTATTTATATAAAATCAATGTACACTAACAACAAGTTTGCAgttaaattagctttaaaacaggcAGATGTATTTCTTCAGGGGCCGTGGGATgaaacagggatgcagcttgaggcCCACCCCCTTcaacatatacactacatgatcaaaagtatgctCTTCAAACATCTCaatacaaaatcatgggcattaacatggatATTAATATTGGTCCCCCTTttatgctataacagcctccactcttctaggaaggctttccactagatgttggaacattgctgtgaggacttgcttccatttagccacaagagcattagtgaggtcgggcactgatgttgggcgattaggcctggctcgcagtcggcgttccaattcatcccaaaggtgtttgatggggttgaggtcagagctctgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119713 True 421 lncRNA 0.35 1 2485197 2485617

Neighbor

gene id symbol gene type direction distance location
LOC118944030 NA coding upstream 64576 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 307201 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 364742 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 583749 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 631627 1816808 ~ 1853570 (+)
LOC118937340 NA coding downstream 492619 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 493169 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 921570 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1565166 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1580375 4065992 ~ 4085680 (+)
G106002 NA non-coding upstream 51 2484797 ~ 2485146 (+)
G105889 NA non-coding upstream 16699 2466823 ~ 2468498 (+)
G105888 NA non-coding upstream 18626 2465164 ~ 2466571 (+)
G105887 NA non-coding upstream 20499 2464444 ~ 2464698 (+)
G105883 NA non-coding upstream 25870 2459062 ~ 2459327 (+)
G106006 NA non-coding downstream 611 2486228 ~ 2486430 (+)
G106015 NA non-coding downstream 29307 2514924 ~ 2536882 (+)
G106023 LOC106593068 non-coding downstream 54340 2539957 ~ 2542574 (+)
G106040 NA non-coding downstream 64238 2549855 ~ 2550138 (+)
G106045 NA non-coding downstream 69095 2554712 ~ 2555100 (+)
G105042 NA other upstream 774640 1708969 ~ 1710557 (+)
G105036 NA other upstream 784766 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1132334 1309202 ~ 1390936 (+)
G104761 NA other upstream 1331448 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1612682 860459 ~ 872515 (+)
G106019 NA other downstream 35099 2520716 ~ 2527972 (+)
G106122 NA other downstream 232344 2717961 ~ 2718525 (+)
G106240 NA other downstream 489206 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 721180 3006312 ~ 3391033 (+)

Expression


Co-expression Network