G106005



Basic Information


Item Value
gene id G106005
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2485198 ~ 2485622 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU119714
ggcctgtacagagctctgacctcaaccccatcaaacacctttgggatgaattggaacgccgactgcgagccaggcctaatcgcccaacatcagtgcccgacctcactaatgctcttgtggctaaatggaagcaagtcctcacagcaatgttccaacatctagtggaaagccttcctagaagagtggaggctgttatagcataaAAGGGGGACCAATATTAATatccatgttaatgcccatgattttgtattGAGATGTTTGAAGagcatacttttgatcatgtagtgtatatgttgAAGGGGGTGGgcctcaagctgcatccctgtttcATCCCACGGCCCCTGAAGAAATACATCTgcctgttttaaagctaatttaacTGCAAACTTGTTGTTAGTGTACATTGATTTTATATAAATAatatg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119714 True 425 lncRNA 0.44 1 2485198 2485622

Neighbor


gene id symbol gene type direction distance location
sox4b sox4 coding downstream 35437 2446374 ~ 2449761 (-)
LOC118937335 NA coding downstream 44896 2273420 ~ 2440302 (-)
LOC118937333 NA coding downstream 181317 2302636 ~ 2303881 (-)
nrsn1 nrsn1 coding downstream 559259 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 752865 1709516 ~ 1732333 (-)
LOC110512766 LOC106593784 coding upstream 28088 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 32565 2518187 ~ 2519022 (-)
LOC110511524 NA coding upstream 48180 2533802 ~ 2536162 (-)
cdkal1 cdkal coding upstream 159268 2644890 ~ 3391012 (-)
LOC118937342 e2f3 coding upstream 907024 3392063 ~ 3405112 (-)
G106000 NA non-coding downstream 2720 2482269 ~ 2482478 (-)
G105997 NA non-coding downstream 4648 2479196 ~ 2480550 (-)
G105996 NA non-coding downstream 7648 2475370 ~ 2477550 (-)
G105995 NA non-coding downstream 10172 2474692 ~ 2475026 (-)
G105994 NA non-coding downstream 10679 2473194 ~ 2474519 (-)
G106043 NA non-coding upstream 67238 2552860 ~ 2553853 (-)
G106044 NA non-coding upstream 68375 2553997 ~ 2554368 (-)
G106047 NA non-coding upstream 69884 2555506 ~ 2555721 (-)
G106048 NA non-coding upstream 71322 2556944 ~ 2557296 (-)
G106052 NA non-coding upstream 78116 2563738 ~ 2563959 (-)
G106003 NA other downstream 75 2483860 ~ 2485123 (-)
G106001 NA other downstream 1842 2482941 ~ 2483356 (-)
G105938 NA other downstream 121667 2362999 ~ 2363531 (-)
G105636 NA other downstream 364697 2118079 ~ 2120501 (-)
G105492 NA other downstream 523611 1958484 ~ 1961587 (-)
LOC110506994 carmil1 other upstream 1266939 3705036 ~ 3924570 (-)
G107456 NA other upstream 1505704 3991326 ~ 3992847 (-)
G107574 NA other upstream 1809803 4295425 ~ 4296815 (-)
G107576 NA other upstream 1811823 4297445 ~ 4302456 (-)
G107755 NA other upstream 1890300 4375922 ~ 4376423 (-)

Expression



Co-expression Network