Gene
RNA
| Item | Value |
|---|---|
| gene id | G106044 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 2553997 ~ 2554368 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119764 | True | 372 | lncRNA | 0.42 | 1 | 2553997 | 2554368 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511524 | NA | coding | downstream | 17835 | 2533802 ~ 2536162 (-) |
| LOC110514306 | NA | coding | downstream | 34975 | 2518187 ~ 2519022 (-) |
| LOC110512766 | LOC106593784 | coding | downstream | 37578 | 2513710 ~ 2516419 (-) |
| sox4b | sox4 | coding | downstream | 104236 | 2446374 ~ 2449761 (-) |
| LOC118937335 | NA | coding | downstream | 113695 | 2273420 ~ 2440302 (-) |
| cdkal1 | cdkal | coding | upstream | 90522 | 2644890 ~ 3391012 (-) |
| LOC118937342 | e2f3 | coding | upstream | 838278 | 3392063 ~ 3405112 (-) |
| LOC118944031 | NA | coding | upstream | 886718 | 3441086 ~ 3443541 (-) |
| LOC110514058 | LOC105007466 | coding | upstream | 892789 | 3447157 ~ 3520769 (-) |
| LOC110512975 | LOC105909030 | coding | upstream | 973002 | 3527370 ~ 3663403 (-) |
| G106043 | NA | non-coding | downstream | 144 | 2552860 ~ 2553853 (-) |
| G106005 | NA | non-coding | downstream | 68375 | 2485198 ~ 2485622 (-) |
| G106000 | NA | non-coding | downstream | 71519 | 2482269 ~ 2482478 (-) |
| G105997 | NA | non-coding | downstream | 73447 | 2479196 ~ 2480550 (-) |
| G105996 | NA | non-coding | downstream | 76447 | 2475370 ~ 2477550 (-) |
| G106047 | NA | non-coding | upstream | 1138 | 2555506 ~ 2555721 (-) |
| G106048 | NA | non-coding | upstream | 2576 | 2556944 ~ 2557296 (-) |
| G106052 | NA | non-coding | upstream | 9370 | 2563738 ~ 2563959 (-) |
| G106054 | NA | non-coding | upstream | 9875 | 2564243 ~ 2564537 (-) |
| G106885 | NA | non-coding | upstream | 23508 | 2577876 ~ 2578254 (-) |
| G106003 | NA | other | downstream | 68874 | 2483860 ~ 2485123 (-) |
| G106001 | NA | other | downstream | 70641 | 2482941 ~ 2483356 (-) |
| G105938 | NA | other | downstream | 190466 | 2362999 ~ 2363531 (-) |
| G105636 | NA | other | downstream | 433496 | 2118079 ~ 2120501 (-) |
| G105492 | NA | other | downstream | 592410 | 1958484 ~ 1961587 (-) |
| LOC110506994 | carmil1 | other | upstream | 1198193 | 3705036 ~ 3924570 (-) |
| G107456 | NA | other | upstream | 1436958 | 3991326 ~ 3992847 (-) |
| G107574 | NA | other | upstream | 1741057 | 4295425 ~ 4296815 (-) |
| G107576 | NA | other | upstream | 1743077 | 4297445 ~ 4302456 (-) |
| G107755 | NA | other | upstream | 1821554 | 4375922 ~ 4376423 (-) |
