G106045


Basic Information

Item Value
gene id G106045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2554712 ~ 2555100 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119765
GGCTAATACCATAAGGGTCTGGCTAATACAATAAGGGTCTGGCTAATACCGTAAGGGTCTAGCTAATACCACAAGGGTCCGGCTAATACCATAAGGGTCTAGCTAATAGCATCTAGCTAATACCATAAGGGTCTAGCTAATACGATAAGGGTCTGGCTAATAGCATAAAGGTCCAGCTAATAGTATAAGAGGGTATCATCGTATTTGCTTCAATTAAGTCCCAGCTATTAAAAGGACACAGTCATTAGAGCCAGTGCTGAGTTGAATATTAAGGACAGACCGGTCACTGTTAATTAGCTTTCATATCTGTATCACAATGTAAAGGAGCCCTAAACGTACCGGTCTTTGACACTgtgtgtgtccaaaatggcaccctattccctatatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119765 True 389 lncRNA 0.57 1 2554712 2555100

Neighbor

gene id symbol gene type direction distance location
LOC118944030 NA coding upstream 134091 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 376716 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 434257 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 653264 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 701142 1816808 ~ 1853570 (+)
LOC118937340 NA coding downstream 423136 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 423686 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 852087 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1495683 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1510892 4065992 ~ 4085680 (+)
G106040 NA non-coding upstream 4574 2549855 ~ 2550138 (+)
G106023 LOC106593068 non-coding upstream 12138 2539957 ~ 2542574 (+)
G106015 NA non-coding upstream 17830 2514924 ~ 2536882 (+)
G106006 NA non-coding upstream 68282 2486228 ~ 2486430 (+)
G106004 NA non-coding upstream 69095 2485197 ~ 2485617 (+)
G106053 NA non-coding downstream 9190 2564290 ~ 2564535 (+)
G106055 NA non-coding downstream 10379 2565479 ~ 2565683 (+)
G106056 NA non-coding downstream 12962 2568062 ~ 2568266 (+)
G106065 NA non-coding downstream 23909 2579009 ~ 2579804 (+)
G106068 NA non-coding downstream 27371 2582471 ~ 2582785 (+)
G106019 NA other upstream 26740 2520716 ~ 2527972 (+)
G105042 NA other upstream 844155 1708969 ~ 1710557 (+)
G105036 NA other upstream 854281 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1201849 1309202 ~ 1390936 (+)
G104761 NA other upstream 1400963 1153061 ~ 1153749 (+)
G106122 NA other downstream 162861 2717961 ~ 2718525 (+)
G106240 NA other downstream 419723 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 651697 3006312 ~ 3391033 (+)
G106575 NA other downstream 1084334 3639434 ~ 3800352 (+)

Expression


Co-expression Network