G106070


Basic Information

Item Value
gene id G106070
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2590319 ~ 2590997 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119794
AAAGCCTGTTTACACACCTGCATCAGGTAAGTCTGAAAGCCTGCAAAGCCTGTTTACACTCCTGCATCAGGTAAGTCTGAAAGCCTGCAAAGCCTGTTTACACACCTGCATCAGGTAAGTCTGAAAGCCTGCAAAGCCTGTTTACACACCTGCATCAGGTAAGTCTGAAAGCCTGCAAAGCCTGTTTACACACCTGTATCAGGTAAGTCTGAAAGCCTGCAAAGCCTGTTTACACACCTGCATCAGGTAAGTCTGAAAGCCTGTTTACACACCTGCATCAGGTAAGTCTGAAAGCCTGCAAAGCCTGTTTACACACCTGCATCAGGTAAGTCTGAAAGCCTGCAAAGCCTGTTTACACACCTGCAtcaggtaagtctgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119794 True 380 lncRNA 0.47 3 2590319 2590997

Neighbor

gene id symbol gene type direction distance location
LOC118944030 NA coding upstream 169698 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 412323 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 469864 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 688871 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 736749 1816808 ~ 1853570 (+)
LOC118937340 NA coding downstream 387239 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 387789 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 816190 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1459786 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1474995 4065992 ~ 4085680 (+)
G106069 NA non-coding upstream 1421 2587572 ~ 2588898 (+)
G106068 NA non-coding upstream 7534 2582471 ~ 2582785 (+)
G106065 NA non-coding upstream 10515 2579009 ~ 2579804 (+)
G106056 NA non-coding upstream 22053 2568062 ~ 2568266 (+)
G106055 NA non-coding upstream 24636 2565479 ~ 2565683 (+)
G106080 NA non-coding downstream 41918 2632915 ~ 2633762 (+)
G106057 NA non-coding downstream 53905 2644902 ~ 2646178 (+)
G106107 NA non-coding downstream 90936 2681933 ~ 2682287 (+)
G106120 NA non-coding downstream 124055 2715052 ~ 2715404 (+)
G106124 NA non-coding downstream 130056 2721053 ~ 2722361 (+)
G106019 NA other upstream 62347 2520716 ~ 2527972 (+)
G105042 NA other upstream 879762 1708969 ~ 1710557 (+)
G105036 NA other upstream 889888 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1237456 1309202 ~ 1390936 (+)
G104761 NA other upstream 1436570 1153061 ~ 1153749 (+)
G106122 NA other downstream 126964 2717961 ~ 2718525 (+)
G106240 NA other downstream 383826 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 615800 3006312 ~ 3391033 (+)
G106575 NA other downstream 1048437 3639434 ~ 3800352 (+)

Expression


Co-expression Network