G106170


Basic Information

Item Value
gene id G106170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2811831 ~ 2812589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119910
CAGCACTTTCACAGCCAGGATTTATTATAAAAGACCACAgctctagtgtgtgtatgtgtgtgtatgtgtggtttgtgtgtgtgtgtggtttgtgtttgCCAGCAGCCTCCAGACTGACTGTCTCAGGTGAGTTGTAGCTTGGCTGCTCTCTGCTACTGGTTGATTAGCAGACAGTCTATTAAGACAAATTCCCTGATCACTGCTACATCGCCCATTCAACTACCACTCAACTACTAGCCAACTACCACTCAactaccaccCAACTACCACCCAACAACCACCCAACTACTAGCCAACAACCACCCAACAACCACTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119910 True 319 lncRNA 0.47 3 2811831 2812589

Neighbor

gene id symbol gene type direction distance location
LOC118944030 NA coding upstream 391210 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 633835 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 691376 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 910383 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 958261 1816808 ~ 1853570 (+)
LOC118937340 NA coding downstream 165647 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 166197 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 594598 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1238194 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1253403 4065992 ~ 4085680 (+)
G106164 NA non-coding upstream 25868 2785613 ~ 2785963 (+)
G106152 NA non-coding upstream 39217 2771726 ~ 2772614 (+)
G106151 NA non-coding upstream 41347 2769985 ~ 2770484 (+)
G106143 NA non-coding upstream 55032 2756008 ~ 2756799 (+)
G106124 NA non-coding upstream 89470 2721053 ~ 2722361 (+)
G106194 NA non-coding downstream 59733 2872322 ~ 2872918 (+)
G106224 NA non-coding downstream 128557 2941146 ~ 2941553 (+)
G106229 NA non-coding downstream 134960 2947549 ~ 2949704 (+)
G106238 NA non-coding downstream 157745 2970334 ~ 2971579 (+)
G106243 NA non-coding downstream 166807 2979396 ~ 2980334 (+)
G106122 NA other upstream 93306 2717961 ~ 2718525 (+)
G106019 NA other upstream 283859 2520716 ~ 2527972 (+)
G105042 NA other upstream 1101274 1708969 ~ 1710557 (+)
G105036 NA other upstream 1111400 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1458968 1309202 ~ 1390936 (+)
G106240 NA other downstream 162234 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 394208 3006312 ~ 3391033 (+)
G106575 NA other downstream 826845 3639434 ~ 3800352 (+)
G106595 NA other downstream 863676 3676265 ~ 3677850 (+)

Expression


Co-expression Network