G106224


Basic Information

Item Value
gene id G106224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2941146 ~ 2941553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119998
ATCTATAACATTAACACTAGACTCAGGTTGCTGGTCCATATCTATAACATTAACACTAGACTCAGGTTACTGGACCATATCTATAACATTAACACTAGACTCAGGTTACTGGTCCATATCTATAACATTAACACTAGACTCAGGTTACTGGACCATATCTATAACATTAACACTAGACTCAGGTTACTGGTCCATATCTATAACATTAACACTAGACTcaggttactggtctatatctataacATTAACACTAGACTCTGGTTACCTGGACCATATCTATAACATTAACACTAGACTCAGGTTACTGGACCATATCTATAACATTAACAC

Function

NR:

description
uncharacterized protein LOC103046400

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119998 True 330 lncRNA 0.35 2 2941146 2941553

Neighbor

gene id symbol gene type direction distance location
LOC118944030 NA coding upstream 520525 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 763150 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 820691 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 1039698 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 1087576 1816808 ~ 1853570 (+)
LOC118937340 NA coding downstream 36683 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 37233 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 465634 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1109230 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1124439 4065992 ~ 4085680 (+)
G106194 NA non-coding upstream 68228 2872322 ~ 2872918 (+)
G106170 NA non-coding upstream 128557 2811831 ~ 2812589 (+)
G106164 NA non-coding upstream 155183 2785613 ~ 2785963 (+)
G106152 NA non-coding upstream 168532 2771726 ~ 2772614 (+)
G106151 NA non-coding upstream 170662 2769985 ~ 2770484 (+)
G106229 NA non-coding downstream 5996 2947549 ~ 2949704 (+)
G106238 NA non-coding downstream 28781 2970334 ~ 2971579 (+)
G106243 NA non-coding downstream 37843 2979396 ~ 2980334 (+)
G106247 NA non-coding downstream 46594 2988147 ~ 2989181 (+)
G106252 NA non-coding downstream 63511 3005064 ~ 3005325 (+)
G106122 NA other upstream 222621 2717961 ~ 2718525 (+)
G106019 NA other upstream 413174 2520716 ~ 2527972 (+)
G105042 NA other upstream 1230589 1708969 ~ 1710557 (+)
G105036 NA other upstream 1240715 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1588283 1309202 ~ 1390936 (+)
G106240 NA other downstream 33270 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 265244 3006312 ~ 3391033 (+)
G106575 NA other downstream 697881 3639434 ~ 3800352 (+)
G106595 NA other downstream 734712 3676265 ~ 3677850 (+)

Expression


Co-expression Network