G106238


Basic Information

Item Value
gene id G106238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2970334 ~ 2971579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120017
gtgagagagagagggagagaaaccacaCTTCCTGGTGTCATAATCTACTCTCCAGCCAGGAGAATGATACAGGGAAAGGTCAAGGGTCAGGAGAGGCATGGAGACAAGTGTCAGAGGGCAGGAAACCAGGGAAGGAGTGTGGTGAACAGAGCGTGGCCAGTGAGAGAAACTAGGGAAGGAGTGTGGTGAACAGAGCGTGGCCAGTGAGAGAAACTAGGGAAGGAGTGTGGTGAACAGAGTGTGGCCTGTGAGAGAAACTAGGGAAGGAGTGTGGTGAACAGAGTGGCCTGTGAGAGAAACTAGGGAAGGAGTGTGGTGAACAGAGTGGCCTGTGAGAGAAACTAGGGAAGGAGTGTGGTGAACAGAGCGTGGCCTGTGAGAGAAACTAGGGAAGGAGTGTGGTGAACAGAGTGGCCTGTGAGAGAAACTAGGGAAGGAGTGTGGTGAACAGAGTGGCCTGTGAGAGAAACTAGGGAAGGAGTGTGGTGAACAGAGTGGCCTGTGAGAGAAACTAGGGAAGGAGTGTGGTGAACAGAGTGTGGCCTGTGAGAGAAACAATCTACATGTCTGTCACCCAGGCTATAATACCATCTACATGTCTGTCACCCAGGCTATAATACCATCTACATGTCTGTGAGCCATGCTATAATACCATCTACATGTCTGTGAGCCATGCTATAATACCATCTACATGTCTGTGAGCCATGCTATAATACCATCTACATGTTTGTGACCCAGGCTATAATACCATCTACATGTTTGTGAGCCATGCTATAATACCATCTACATGTCTGTGAGCCATGCTATAATACCATCTACATGTTTGTGGAGTAATGTGGGTACTCACACTATAACCATGGAAAGGAAACTGTCTTTCAGCCAGGCAGGACACACGAGGGGAGAGGACGGTGTGAGGACACTGGAGGGGAGAGGACGGCGTGAGGACACTGGAGGGGAGAGGACGGTGTGAGGACACTGGAGGGGAGAGGACGGTGTGAGGACACTGGAGGGGAGAGGACGGTGTGAGGACACTGGAGGGGAGAGGACGGTGTGAGGACACTGGAGGGGAGAGGACGGTGTGAGGac
>TU120016
GGAGTGTGGTGAACAGAGTGTGGCCTGTGAGAGAAACAATCTACATGTCTGTCACCCAGGCTATAATACCATCTACATGTCTGTCACCCAGGCTATAATACCATCTACATGTCTGTGAGCCATGCTATAATACCATCTACATGTCTGTGAGCCATGCTATAATACCATCTACATGTTTGTGAGCCATGCTATAATACCATCTACATGTCTGTCACCCAGGCTATAATACCATCTACATGTCTGTCACCCAGGCTATAATACCATCTACATGTTTGTGACCCAGGCTATAATACCATCTACATGTTTGTGACCCAGGCTATAATACCATCTACATGTCTGTGAGCCATGCTATAATACCATCTACATGTTTGTGACCCAGGCTATAATACCATCTACATGTTTGTGAGCCATGCTATAATACCATCTACATGTCTGTGAGCCATGCTATAATACCATCTACATGTTTGTGGAGTAATGTGGGTACTCACACTATAACCATGGAAAGGAAACTGTCTTTCAGCCAGGCAGGACACACGAGGGGAGAGGACGGTGTGAGGACACTGGAGGGGAGAGGACGGTGTGAGGACACTGGAGGGGAGAGGACGGTGTGAGGac

Function

NR:

description
PREDICTED: neuroendocrine protein 7B2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120017 False 1086 lncRNA 0.52 2 2970334 2971579
TU120016 True 615 lncRNA 0.45 2 2970853 2971579

Neighbor

gene id symbol gene type direction distance location
LOC118944030 NA coding upstream 549713 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 792338 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 849879 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 1068886 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 1116764 1816808 ~ 1853570 (+)
LOC118937340 NA coding downstream 6657 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 7207 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 435608 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1079204 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1094413 4065992 ~ 4085680 (+)
G106229 NA non-coding upstream 20630 2947549 ~ 2949704 (+)
G106224 NA non-coding upstream 28781 2941146 ~ 2941553 (+)
G106194 NA non-coding upstream 97416 2872322 ~ 2872918 (+)
G106170 NA non-coding upstream 157745 2811831 ~ 2812589 (+)
G106164 NA non-coding upstream 184371 2785613 ~ 2785963 (+)
G106243 NA non-coding downstream 7817 2979396 ~ 2980334 (+)
G106247 NA non-coding downstream 16568 2988147 ~ 2989181 (+)
G106252 NA non-coding downstream 33485 3005064 ~ 3005325 (+)
G106253 cdkal non-coding downstream 34733 3006312 ~ 3391033 (+)
G106260 NA non-coding downstream 53554 3025133 ~ 3025905 (+)
G106122 NA other upstream 251809 2717961 ~ 2718525 (+)
G106019 NA other upstream 442362 2520716 ~ 2527972 (+)
G105042 NA other upstream 1259777 1708969 ~ 1710557 (+)
G105036 NA other upstream 1269903 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1617471 1309202 ~ 1390936 (+)
G106240 NA other downstream 3244 2974823 ~ 3039475 (+)
G106575 NA other downstream 667855 3639434 ~ 3800352 (+)
G106595 NA other downstream 704686 3676265 ~ 3677850 (+)

Expression


Co-expression Network