G106240


Basic Information

Item Value
gene id G106240
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2974823 ~ 3039475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120020
gtgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctcagggatttgaacttgcaaccttccggttactagtccaacgctctaaccactaggctaccctgccgccACAGAACGTTCCAGAAAGAGACATGACAGAAGCATAGAAGTCAGCCAACAACTGCTGAGGGATTCACCAAAAAGTCTTTAAATATTAGTTTTTTTAACAACGTTTGTTCAATTATTTTAATTCCATTTAGTATTTTCTcgagagataaatcagatcaagtctgaactgtgcgatgtagtagagTGTTATTCCCACATAGTTTAGCACAGAGATTGTAGTAACTCACTACAATGACTATAATCCATTGCGCGCTCgtctacttgtccggtctgtgtggagcagacaggaggagatggagagggagagaaaggagaggagaatgtgggatggagagggagagaaaggagaggagaatgtgggatgtagagggagaggaaggagaggagaatgtgggatggagagggagagaaaggagaggagaatgtgggatggagagggagaggaaggagaggagaatgtgggatggagagggagagaaaggagaggagaatgtgggatggagagggagagaaaggagaggagaatgtgggatggagagggagagaaaggagaggagaatgtgggatgtagagggagaggaaggagaggagaatgtgggatgga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120020 True 724 TUCP 0.40 2 2974823 3039475

Neighbor

gene id symbol gene type direction distance location
LOC118944030 NA coding upstream 554202 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 796827 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 854368 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 1073375 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 1121253 1816808 ~ 1853570 (+)
mboat1 LOC106573215 coding downstream 367712 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1011308 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1026517 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 1073647 4113122 ~ 4119742 (+)
deptor deptor coding downstream 1197405 4236880 ~ 4302536 (+)
G106238 NA non-coding upstream 3244 2970334 ~ 2971579 (+)
G106229 NA non-coding upstream 25119 2947549 ~ 2949704 (+)
G106224 NA non-coding upstream 33270 2941146 ~ 2941553 (+)
G106194 NA non-coding upstream 101905 2872322 ~ 2872918 (+)
G106170 NA non-coding upstream 162234 2811831 ~ 2812589 (+)
G106263 NA non-coding downstream 781 3040256 ~ 3046547 (+)
G106267 NA non-coding downstream 17536 3057011 ~ 3057663 (+)
G106269 NA non-coding downstream 18673 3058148 ~ 3058788 (+)
G106277 NA non-coding downstream 28179 3067654 ~ 3068028 (+)
G106284 NA non-coding downstream 39625 3079100 ~ 3081508 (+)
G106122 NA other upstream 256298 2717961 ~ 2718525 (+)
G106019 NA other upstream 446851 2520716 ~ 2527972 (+)
G105042 NA other upstream 1264266 1708969 ~ 1710557 (+)
G105036 NA other upstream 1274392 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1621960 1309202 ~ 1390936 (+)
G106253 cdkal other downstream 167322 3006312 ~ 3391033 (+)
G106575 NA other downstream 599959 3639434 ~ 3800352 (+)
G106595 NA other downstream 636790 3676265 ~ 3677850 (+)
G106775 NA other downstream 987600 4027075 ~ 4027594 (+)

Expression


Co-expression Network