G106252


Basic Information

Item Value
gene id G106252
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3005064 ~ 3005325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120032
TAGGCGGATGAACCCATCGCTAGGCGGAGGAACCCATCGCTAGGCGGATGAACCCATCGCTAGGCGGAGGAACCCATCGCTAGGCGGAGGAACCCATCGCTAGGCAGACGAACCCATCGCTAGGCGGAGGAACCCATCGCTAGGCGGAGGAACCCATCGCTAGGCGGAGGAACCCATCGCTAGGCGGATGAACCCATCGCTAGGCGGAGGAACCCATCGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120032 True 222 lncRNA 0.63 2 3005064 3005325

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 24871 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 26540 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 584443 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 827068 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 884609 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 401862 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1045458 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1060667 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 1107797 4113122 ~ 4119742 (+)
deptor deptor coding downstream 1231555 4236880 ~ 4302536 (+)
G106247 NA non-coding upstream 15883 2988147 ~ 2989181 (+)
G106243 NA non-coding upstream 24730 2979396 ~ 2980334 (+)
G106238 NA non-coding upstream 33485 2970334 ~ 2971579 (+)
G106229 NA non-coding upstream 55360 2947549 ~ 2949704 (+)
G106224 NA non-coding upstream 63511 2941146 ~ 2941553 (+)
G106253 cdkal non-coding downstream 987 3006312 ~ 3391033 (+)
G106260 NA non-coding downstream 19808 3025133 ~ 3025905 (+)
G106263 NA non-coding downstream 34931 3040256 ~ 3046547 (+)
G106267 NA non-coding downstream 51686 3057011 ~ 3057663 (+)
G106269 NA non-coding downstream 52823 3058148 ~ 3058788 (+)
G106122 NA other upstream 286539 2717961 ~ 2718525 (+)
G106019 NA other upstream 477092 2520716 ~ 2527972 (+)
G105042 NA other upstream 1294507 1708969 ~ 1710557 (+)
G105036 NA other upstream 1304633 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1652201 1309202 ~ 1390936 (+)
G106575 NA other downstream 634109 3639434 ~ 3800352 (+)
G106595 NA other downstream 670940 3676265 ~ 3677850 (+)
G106775 NA other downstream 1021750 4027075 ~ 4027594 (+)

Expression


Co-expression Network