G106305


Basic Information

Item Value
gene id G106305
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3121333 ~ 3122375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120107
CGGTATCCTAGGACACGTCCTCAGGGCTCAGACCAGACGGTATCCTAGGACACGTCCTCAGGGCTCAGACCAGCTGGTATCCTAGGACACGTCCTCAGGGCTCAGAACAGCTGGCTGTGTTCACGGATAAATTCAACCTTATCCCAGTCCGtggtccccacatgcttcaatatgtccaGCGTTATCCCTGTAGAACTCATTATCCCTGTACCCAAGCCCTGTAGAACTCATTATCCCTGTACCCAAGCCCTGTAGAACTCATTATCCCTGTACCCACGCAAAGGCAACCtggctaaatgactaccaccctgtagaACTCATtatcctatacacacacacacatccacacaccctaattacacacacacacacacaccctacgtacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120107 True 388 lncRNA 0.51 3 3121333 3122375

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 141140 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 142809 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 700712 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 943337 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 1000878 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 284812 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 928408 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 943617 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 990747 4113122 ~ 4119742 (+)
deptor deptor coding downstream 1114505 4236880 ~ 4302536 (+)
G106301 NA non-coding upstream 7590 3112988 ~ 3113743 (+)
G106291 NA non-coding upstream 14626 3090889 ~ 3106707 (+)
G106295 NA non-coding upstream 19444 3094422 ~ 3101889 (+)
G106296 NA non-coding upstream 24572 3094855 ~ 3096761 (+)
G106285 NA non-coding upstream 39008 3079563 ~ 3082325 (+)
G106309 NA non-coding downstream 1900 3124275 ~ 3167091 (+)
G106322 NA non-coding downstream 22414 3144789 ~ 3197116 (+)
G106325 NA non-coding downstream 24985 3147360 ~ 3148142 (+)
G106326 NA non-coding downstream 27998 3150373 ~ 3150869 (+)
G106333 NA non-coding downstream 41855 3164230 ~ 3164774 (+)
G106240 NA other upstream 81858 2974823 ~ 3039475 (+)
G106122 NA other upstream 402808 2717961 ~ 2718525 (+)
G106019 NA other upstream 593361 2520716 ~ 2527972 (+)
G105042 NA other upstream 1410776 1708969 ~ 1710557 (+)
G105036 NA other upstream 1420902 1699073 ~ 1700431 (+)
G106253 cdkal other downstream 84422 3006312 ~ 3391033 (+)
G106575 NA other downstream 517059 3639434 ~ 3800352 (+)
G106595 NA other downstream 553890 3676265 ~ 3677850 (+)
G106775 NA other downstream 904700 4027075 ~ 4027594 (+)

Expression


Co-expression Network