G106309


Basic Information

Item Value
gene id G106309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3124275 ~ 3167091 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120111
gagagagatgagagaacaaCGAACAGCGTTTAAcagctttaaaaaataaataaaaatcacgTATGAATTCATCTTCATCGTGGACTCGGATGTCAGAAGGCCTCAGGGAGACAGTTATGCTTTTTCCATTTAGTAATAGCGATGCCAAACGCCTGGTATTATGTGATAAACCACAAGTATTAGTCTACACTGTAATACTGCACTATACCTGAGGTAAAAACACACAAAAACACACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120111 True 237 lncRNA 0.45 2 3124275 3167091

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 144082 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 145751 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 703654 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 946279 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 1003820 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 240096 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 883692 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 898901 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 946031 4113122 ~ 4119742 (+)
deptor deptor coding downstream 1069789 4236880 ~ 4302536 (+)
G106305 NA non-coding upstream 1900 3121333 ~ 3122375 (+)
G106301 NA non-coding upstream 10532 3112988 ~ 3113743 (+)
G106291 NA non-coding upstream 17568 3090889 ~ 3106707 (+)
G106295 NA non-coding upstream 22386 3094422 ~ 3101889 (+)
G106296 NA non-coding upstream 27514 3094855 ~ 3096761 (+)
G106351 NA non-coding downstream 35514 3202605 ~ 3266098 (+)
G106368 NA non-coding downstream 75266 3242357 ~ 3242931 (+)
G106371 NA non-coding downstream 79318 3246409 ~ 3246714 (+)
G106388 NA non-coding downstream 101541 3268632 ~ 3268878 (+)
G106400 NA non-coding downstream 117229 3284320 ~ 3285155 (+)
G106240 NA other upstream 84800 2974823 ~ 3039475 (+)
G106122 NA other upstream 405750 2717961 ~ 2718525 (+)
G106019 NA other upstream 596303 2520716 ~ 2527972 (+)
G105042 NA other upstream 1413718 1708969 ~ 1710557 (+)
G105036 NA other upstream 1423844 1699073 ~ 1700431 (+)
G106253 cdkal other downstream 39706 3006312 ~ 3391033 (+)
G106575 NA other downstream 472343 3639434 ~ 3800352 (+)
G106595 NA other downstream 509174 3676265 ~ 3677850 (+)
G106775 NA other downstream 859984 4027075 ~ 4027594 (+)

Expression


Co-expression Network