G106322


Basic Information

Item Value
gene id G106322
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3144789 ~ 3197116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120124
tgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacttatttttgaaccattccattgtagattttgctttatattttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtctgttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtgggcatggtgtgtt

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120124 True 449 lncRNA 0.30 2 3144789 3197116

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 164596 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 166265 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 724168 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 966793 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 1024334 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 210071 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 853667 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 868876 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 916006 4113122 ~ 4119742 (+)
deptor deptor coding downstream 1039764 4236880 ~ 4302536 (+)
G106305 NA non-coding upstream 22414 3121333 ~ 3122375 (+)
G106301 NA non-coding upstream 31046 3112988 ~ 3113743 (+)
G106291 NA non-coding upstream 38082 3090889 ~ 3106707 (+)
G106295 NA non-coding upstream 42900 3094422 ~ 3101889 (+)
G106296 NA non-coding upstream 48028 3094855 ~ 3096761 (+)
G106351 NA non-coding downstream 5489 3202605 ~ 3266098 (+)
G106368 NA non-coding downstream 45241 3242357 ~ 3242931 (+)
G106371 NA non-coding downstream 49293 3246409 ~ 3246714 (+)
G106388 NA non-coding downstream 71516 3268632 ~ 3268878 (+)
G106400 NA non-coding downstream 87204 3284320 ~ 3285155 (+)
G106240 NA other upstream 105314 2974823 ~ 3039475 (+)
G106122 NA other upstream 426264 2717961 ~ 2718525 (+)
G106019 NA other upstream 616817 2520716 ~ 2527972 (+)
G105042 NA other upstream 1434232 1708969 ~ 1710557 (+)
G105036 NA other upstream 1444358 1699073 ~ 1700431 (+)
G106253 cdkal other downstream 9681 3006312 ~ 3391033 (+)
G106575 NA other downstream 442318 3639434 ~ 3800352 (+)
G106595 NA other downstream 479149 3676265 ~ 3677850 (+)
G106775 NA other downstream 829959 4027075 ~ 4027594 (+)

Expression


Co-expression Network