G106326


Basic Information

Item Value
gene id G106326
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3150373 ~ 3150869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120128
tctctctctctctcaactaacCAACacattgccctctctctctcagctaaccAACacattgccctctctctctcaactaacCAACAcattgccccctctctctctctcaactaacCAACacattgccctctctctctcaactaacCAACacattgccctctctctctcagctaaccAACAcattgccctctctctctcagctaaccAACacattgccctctctctctctctcagctaaccAACtcattgccctctctctctcaactaacCAACacattgccctctctctctctctcagctaaccAACACATGACCCTCaaacattttaatattttttccgtacacacacacacatcaccaaaCAGGCTCTGGGAAAATGTCTGTGTTTAAAACATTCCCAGAGTAGGAGTCAGACAGTGTAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120128 True 425 lncRNA 0.40 2 3150373 3150869

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 170180 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 171849 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 729752 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 972377 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 1029918 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 256318 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 899914 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 915123 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 962253 4113122 ~ 4119742 (+)
deptor deptor coding downstream 1086011 4236880 ~ 4302536 (+)
G106325 NA non-coding upstream 2231 3147360 ~ 3148142 (+)
G106305 NA non-coding upstream 27998 3121333 ~ 3122375 (+)
G106301 NA non-coding upstream 36630 3112988 ~ 3113743 (+)
G106291 NA non-coding upstream 43666 3090889 ~ 3106707 (+)
G106295 NA non-coding upstream 48484 3094422 ~ 3101889 (+)
G106333 NA non-coding downstream 13361 3164230 ~ 3164774 (+)
G106351 NA non-coding downstream 51736 3202605 ~ 3266098 (+)
G106368 NA non-coding downstream 91488 3242357 ~ 3242931 (+)
G106371 NA non-coding downstream 95540 3246409 ~ 3246714 (+)
G106388 NA non-coding downstream 117763 3268632 ~ 3268878 (+)
G106240 NA other upstream 110898 2974823 ~ 3039475 (+)
G106122 NA other upstream 431848 2717961 ~ 2718525 (+)
G106019 NA other upstream 622401 2520716 ~ 2527972 (+)
G105042 NA other upstream 1439816 1708969 ~ 1710557 (+)
G105036 NA other upstream 1449942 1699073 ~ 1700431 (+)
G106253 cdkal other downstream 55928 3006312 ~ 3391033 (+)
G106575 NA other downstream 488565 3639434 ~ 3800352 (+)
G106595 NA other downstream 525396 3676265 ~ 3677850 (+)
G106775 NA other downstream 876206 4027075 ~ 4027594 (+)

Expression


Co-expression Network