G106368


Basic Information

Item Value
gene id G106368
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3242357 ~ 3242931 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120184
ACACTACTGTAAATGTTTACCACCGTTGTACATCACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATTACACTACTGTAAATGTTTACCACTGTTGTACATTACACTACTGTAAATGTTTACCACTGTTGTACATTACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATCACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATCACACAACTGTAAATGTTTACCACTGTTGTAC
>TU120187
ACACTACTGTAAATGTTTACCACCGTTGTACATCACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATTACACTACTGTAAATGTTTACCACTGTTGTACATTACACTACTGTAAATGTTTACCACTGTTGTACATTACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATCACACAACTGTAAATGTTTACCACTGTTGTAC
>TU120188
ACACTACTGTAAATGTTTACCACCGTTGTACATCACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATCACACAACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATCACACTACTGTAAATGTTTACCACTGTTGTACATCACACTACTGTAAATGTTTACCACCGTTGTACATCACACAACTGTAAATGTTTACCACTGTTGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120184 False 439 lncRNA 0.36 2 3242357 3242931
TU120187 False 337 lncRNA 0.33 3 3242357 3242931
TU120188 True 303 lncRNA 0.53 3 3242357 3242931

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 262164 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 263833 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 821736 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1064361 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 1121902 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 164256 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 807852 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 823061 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 870191 4113122 ~ 4119742 (+)
deptor deptor coding downstream 993949 4236880 ~ 4302536 (+)
G106253 cdkal non-coding upstream 33351 3006312 ~ 3391033 (+)
G106322 NA non-coding upstream 45241 3144789 ~ 3197116 (+)
G106309 NA non-coding upstream 75266 3124275 ~ 3167091 (+)
G106333 NA non-coding upstream 77583 3164230 ~ 3164774 (+)
G106326 NA non-coding upstream 91488 3150373 ~ 3150869 (+)
G106371 NA non-coding downstream 3478 3246409 ~ 3246714 (+)
G106388 NA non-coding downstream 25701 3268632 ~ 3268878 (+)
G106400 NA non-coding downstream 41389 3284320 ~ 3285155 (+)
G106439 NA non-coding downstream 126704 3369635 ~ 3370092 (+)
G106240 NA other upstream 202882 2974823 ~ 3039475 (+)
G106122 NA other upstream 523832 2717961 ~ 2718525 (+)
G106019 NA other upstream 714385 2520716 ~ 2527972 (+)
G105042 NA other upstream 1531800 1708969 ~ 1710557 (+)
G105036 NA other upstream 1541926 1699073 ~ 1700431 (+)
G106575 NA other downstream 396503 3639434 ~ 3800352 (+)
G106595 NA other downstream 433334 3676265 ~ 3677850 (+)
G106775 NA other downstream 784144 4027075 ~ 4027594 (+)
G106814 NA other downstream 894882 4137813 ~ 4138496 (+)

Expression


Co-expression Network