G106400


Basic Information

Item Value
gene id G106400
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3284320 ~ 3285155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120223
CGGATAACAACACAACCACGGATAACAACACAACCACGGATAACAACACAACCACGGATAACAACACAACCACGGATAACAACACAACCACGGATAACAACACAACCATGGATAACAACACAACCATGGATAACAACACAACCATGGATAACAACACAACCACGGATAACAACACAACCATGGATAACAACACAACCATGGataacaacacacagaacaaaaccaCCATAGATAAGATGGTTGTATGACCTAAAACACACTTCCCTTTTCTCCCATTTTCTCTCTCACCCGATCACCATCTAACACATTAGCACAACCACACaacacatcatcacacacacacacacacctatgacCTCCTGCTCCCTGTCCCGGTCTTATCACCGAGGAGTCTGCCCCAGCAGCTCACGGTAAGATCAATGACCATATGGTGGAAGTGGCAGTTTAGAAGCAGGCGTTTGgaaccatgacacacacacacacacacacacacacaccaggagccTCAACATTCCCCTCTGGAGCCACTTCGTACTGCAGACGCCCAGGGCAGGCAGCCGCTCACTTCAATTAGGCTGGTAATTAGCAGCGCGGCCTAGCAGTGTGAATAAGCCGACCACTACCGTAGCAAGTGCTGGAACAAAAGATGCCCGGGCCTCAGAAATTACCATAGCATCTGAATCATtgatacattatattacattagcCCCTGGTGTGCTAATCTATT

Function

NR:

description
PREDICTED: pheromone-regulated protein PRM7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120223 True 727 lncRNA 0.47 2 3284320 3285155

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 304127 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 305796 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 863699 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1106324 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 1163865 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 122032 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 765628 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 780837 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 827967 4113122 ~ 4119742 (+)
deptor deptor coding downstream 951725 4236880 ~ 4302536 (+)
G106388 NA non-coding upstream 15442 3268632 ~ 3268878 (+)
G106351 NA non-coding upstream 18222 3202605 ~ 3266098 (+)
G106371 NA non-coding upstream 37606 3246409 ~ 3246714 (+)
G106368 NA non-coding upstream 41389 3242357 ~ 3242931 (+)
G106322 NA non-coding upstream 87204 3144789 ~ 3197116 (+)
G106439 NA non-coding downstream 84480 3369635 ~ 3370092 (+)
G106450 NA non-coding downstream 107547 3392702 ~ 3395056 (+)
G106454 e2f3 non-coding downstream 114273 3399428 ~ 3399851 (+)
G106461 NA non-coding downstream 131394 3416549 ~ 3447539 (+)
G106240 NA other upstream 244845 2974823 ~ 3039475 (+)
G106122 NA other upstream 565795 2717961 ~ 2718525 (+)
G106019 NA other upstream 756348 2520716 ~ 2527972 (+)
G105042 NA other upstream 1573763 1708969 ~ 1710557 (+)
G105036 NA other upstream 1583889 1699073 ~ 1700431 (+)
G106575 NA other downstream 354279 3639434 ~ 3800352 (+)
G106595 NA other downstream 391110 3676265 ~ 3677850 (+)
G106775 NA other downstream 741920 4027075 ~ 4027594 (+)
G106814 NA other downstream 852658 4137813 ~ 4138496 (+)

Expression


Co-expression Network