G107219


Basic Information

Item Value
gene id G107219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3367145 ~ 3425978 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU121502
ctttatttaactaggcaagtcagttaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgccttgttcaggggcagaaccacagatttgtaccttgtcagctcagggatttgaacttgcaaccttccggttactagtccaatgctctaggctaccctgccgcccctccactctaaccactaggctaccctgccgcccctccactctaatcactaggctacctgccgcctctagaGATGACGGATCACCTGGAATGAGACTGAACCAGCTTTTCTGTGGTTGAGGAAGATAGTTATCTGAAGATGGACATCTTGTACAGTATGTTGCCGTCTTGTCTCCAttgatcagatcagatcagtaaCTATCTCCTCTATCATATGGGCTCATAGTAGTTACATACAACTTATGTTATTGCCATTGTGTCGCCATAGTGAACGTTATGCTACTGACGATACAATTTGACGGTATTATTCAAGACACAATCAAAAGGCTAAAAGGCACACATTGATCATTTGTAATTTCTTTATGCTCTTAATATTGGTTAATAACTTGATTGGTGGAATTATTTTTAAAAAGAAGACACATTCAAACCGTCTGGGTAAAAAACAACTATTCAACAGTTTATGGTGTCCTGACTAGaattatagtgtgtagtgtgtgtagtgtgtgtagtgtgtgtgtgtagtgtgtagtgtgtggtgtgtgtgtagtgtgtgtgtgtgtgtgtagtgtgtgtgtgtgtagtgtgtggtgtgtgtgtgtgtgtgtagtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagcgtgtagtgtgtagtgtccaGACACTCTTCATATTAGCATCATTAGTGGTTCAGCTGCTTCAGGACTTGAAATGTTGAAGATCTTGTAGTGTGAAGATCTTGGACCTTCTTCTGAGGCATAGAAGACTTCCACATCATCCCCTGAAACAAAGTCAACGTCTGCGTCCCCCATAAGGCCCTGTTtaaaaaggtagtgcactacacaggcaatagggtgccattcgggacagAACCCAAAGACTTTCCTTCAGAAGTCATTGGTGCTTCCTGCACCTCATCTGAGACTGTGAGACTTTAAAGTTAATACAACATTTACATTTCTTTTCTTATTTAAACGGACAAAATTAATGAAATCTCAACTTCCTGCCAAATAAAAGTAAACTTGTCCATCCTCTCAAATACATAGAGACACATGAAATGAATATTAGGAGACCTGATGTACAGCATCCACTGTTAAAAACGAGTCAAACAGCTCCTAACTAGAGCCTCATAACTATGTTCCGAATCAAACAGCTCCTATTCTCTATACACTACACTGCTTTGGACCAGAACCCATCTGGACCAGAACCCATCTGGACCAGGGCCCATCTGGACCAGAACCCATCTGGACCAGAACCCATCTGGACCAGGACCAGGGCCCATCTGGACCAGGGCCCATCTGGACCAGAACCCATCTAGACCAGGACCAGGGCCCATCTGGACCAGAACCCATCTGGACCAGAACCCATCTGGACCAGAACCCATCTGGACCAGGACCCATCTGGACCAGAACCCATCtggactatacagggaatagggtgccatttgggacgaatctTTCGAAAGGATTGTGCTGTCACACACAAGTGTATttcttgcatatcccaactccccctgagacacccgcagggagtggggtcaccatatcccaactcccccgagacacccgcagggagtggggtcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcaggatcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcaggatcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacccgcagggagtggggtcacggtcaggatcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacccgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccccgAGACACctgcagggagtggggtcacggtcagggtcaccatatcccaactccccgaGACACctgcagggagtggggtcacggtcagggtcaccatatcccaactcccccgaGACACctgcagggagtggggtcacggtcaggatcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacccgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacccgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccctgagacacctgcagggagtggggtcacggtcagggtcaccatatcccaactccccccgAGACACctgcagggagtggggtcacggtcaggatcaccatatcccaactcccccgaGACACctgcagggagtggggtcacggtcaggatcaccatatcccaactccccctgagacacctgcagagagtggggtcacggtcagggtcaccattgtacagagcccctggagcaattaggtttaaagtgccttgctcaagggcacagcgacAGATTTTTCAtctctgttactggcccaacactaacctcgaggctacctgccatcctgAGGGATAATGTTTCCTGTATTCATACAACAATAAACAGACACCATTAATATCTCACTAACCCCTAAGGGTATGAACATGTTTGACATAATATCTACAACTAGTGATGTAAGATGTAAAAGAAATGGGCCAGCCACATCTAATtctaggacctgtctgtctgtctctgggtctctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgcctgtctgtctgtctggaggcctgtctgtctgccatgcCGTGAAGAGAAAGGAGCCATTTAATAAATCCTCAGTTT
>TU121501
CCACATCTAATtctaggacctgtctgtctgtctctgggtctctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctctgggtctctgtccgtccgtctgtctctgggtctctgtccgtccgtccgtctgtctctgggtctctgtctgtccgtccgtctgtctctgggtctctgtccgtccgtccgtctgtctctgggtctctgtctgtccgtccgtctgtctctgggtctctgtccgtctgtctctgggtctctgtccgtctgtctctgggtctctgtccgtccgtccgtctgtctctgggtctctgtctgtccgtccgtctgtctctgggtctctgtctgtctgtccgtccgtccgtctgtctctgggtctctgtccgtctgtctctgggtgtctgtccgtctgtccgtctgtctctgggtctctgtccgtctgtctctgggtctctggccgtctgtctctgggtctctggccgtctgtctctgggtctctggccgtctgtctctgggtctctgtccgtctgtctctgggtctctgtccgtctgtctctgggtctctgtccgtctgtccgtccgtccgtccgtctgtctgtgagCCCAGTTCTCAGATCTTTCTCCTGAAGTATACTATCTCACTTGTGCACAGCTTCCCACACATTGAATGAAAAGTGTTGTATTGGTGAGTTTATG

Function

NR:

description
PREDICTED: histone-lysine N-methyltransferase 2C-like isoform X11

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU121502 False 3490 lncRNA 0.52 2 3367145 3425978
TU121501 True 716 lncRNA 0.57 3 3421883 3422664

Neighbor

gene id symbol gene type direction distance location
LOC110511524 NA coding downstream 830983 2533802 ~ 2536162 (-)
LOC110514306 NA coding downstream 848123 2518187 ~ 2519022 (-)
LOC110512766 LOC106593784 coding downstream 850726 2513710 ~ 2516419 (-)
sox4b sox4 coding downstream 917384 2446374 ~ 2449761 (-)
LOC118937335 NA coding downstream 926843 2273420 ~ 2440302 (-)
LOC118944031 NA coding upstream 15108 3441086 ~ 3443541 (-)
LOC110514058 LOC105007466 coding upstream 21179 3447157 ~ 3520769 (-)
LOC110512975 LOC105909030 coding upstream 101392 3527370 ~ 3663403 (-)
LOC118937345 NA coding upstream 189105 3615083 ~ 3619295 (-)
LOC118937344 NA coding upstream 209668 3635646 ~ 3637696 (-)
G107232 NA non-coding downstream 1681 3363896 ~ 3365464 (-)
G107231 NA non-coding downstream 2404 3362792 ~ 3364741 (-)
G107230 NA non-coding downstream 4003 3359708 ~ 3363142 (-)
G107228 NA non-coding downstream 10123 3355884 ~ 3357022 (-)
G107218 NA non-coding downstream 39995 3326814 ~ 3327150 (-)
G107270 NA non-coding upstream 5948 3431926 ~ 3433121 (-)
G107282 NA non-coding upstream 29445 3455423 ~ 3456292 (-)
G107303 NA non-coding upstream 79003 3504981 ~ 3506013 (-)
G107306 NA non-coding upstream 87535 3513513 ~ 3513988 (-)
G107254 NA non-coding upstream 98636 3524614 ~ 3526803 (-)
G106003 NA other downstream 882022 2483860 ~ 2485123 (-)
G106001 NA other downstream 883789 2482941 ~ 2483356 (-)
G105938 NA other downstream 1003614 2362999 ~ 2363531 (-)
G105636 NA other downstream 1246644 2118079 ~ 2120501 (-)
G105492 NA other downstream 1405558 1958484 ~ 1961587 (-)
LOC110506994 carmil1 other upstream 326583 3705036 ~ 3924570 (-)
G107456 NA other upstream 565348 3991326 ~ 3992847 (-)
G107574 NA other upstream 869447 4295425 ~ 4296815 (-)
G107576 NA other upstream 871467 4297445 ~ 4302456 (-)
G107755 NA other upstream 949944 4375922 ~ 4376423 (-)

Expression

G107219 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 125.
End of interactive chart.

G107219 Expression in each Bioproject

Bar chart with 21 bars.
G107219 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3000.
End of interactive chart.

Co-expression Network