G106439


Basic Information

Item Value
gene id G106439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3369635 ~ 3370092 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120351
TGTCTGTTAGCTGCTTTTTAAACACTCTCCAGCTCTCATATTACATGGTAGGTTTAAAACCACTCTCCAGCTCTCATATTACATGGTAGGTTTAAAACCACTCTCCAGCTCTCATATTACATGGTAGGTTTAAAACCACTCTCCAGCTCTCATATTACATGGTAGGTTTAAAACCACTCTCCAGCTCTGCAGGTTGTGTGTAGTAGAGAAGGGCTGTGGGAGGGGCCACAGCTCTGCAGGTTGTGTGTAGTACAGAAGGGCTGGTGGGAGGGGCCACAGCTCTGCAGGTTGTGTGTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120351 True 299 lncRNA 0.47 3 3369635 3370092

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 389442 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 391111 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 949014 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1191639 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 1249180 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 37095 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 680691 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 695900 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 743030 4113122 ~ 4119742 (+)
deptor deptor coding downstream 866788 4236880 ~ 4302536 (+)
G106400 NA non-coding upstream 84480 3284320 ~ 3285155 (+)
G106388 NA non-coding upstream 100757 3268632 ~ 3268878 (+)
G106351 NA non-coding upstream 103537 3202605 ~ 3266098 (+)
G106450 NA non-coding downstream 22610 3392702 ~ 3395056 (+)
G106454 e2f3 non-coding downstream 29336 3399428 ~ 3399851 (+)
G106461 NA non-coding downstream 46457 3416549 ~ 3447539 (+)
G106463 NA non-coding downstream 59697 3429789 ~ 3431551 (+)
G106465 NA non-coding downstream 61872 3431964 ~ 3433787 (+)
G106240 NA other upstream 330160 2974823 ~ 3039475 (+)
G106122 NA other upstream 651110 2717961 ~ 2718525 (+)
G106019 NA other upstream 841663 2520716 ~ 2527972 (+)
G105042 NA other upstream 1659078 1708969 ~ 1710557 (+)
G105036 NA other upstream 1669204 1699073 ~ 1700431 (+)
G106575 NA other downstream 269342 3639434 ~ 3800352 (+)
G106595 NA other downstream 306173 3676265 ~ 3677850 (+)
G106775 NA other downstream 656983 4027075 ~ 4027594 (+)
G106814 NA other downstream 767721 4137813 ~ 4138496 (+)
G107922 NA other downstream 1374076 4744168 ~ 4745586 (+)

Expression


Co-expression Network