G106465


Basic Information

Item Value
gene id G106465
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3431964 ~ 3433787 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120416
atctacctccagtaTCCCTGCTCACCGTTAATATgatactggaactgaccctgtgtCTACAGTAGCTAACTTCTCATGGTCTTATTTCTTATATCTCccgtgtttttgttctaccttgttatttcaGTACCACATTGAtgttgattactgcattgttcgGGTTTTTAGAGTTTGCAAGAAAAGCATTTCAGTCTTGGTAATCAAGAGTACAAATGGAACACCCCACATAACATATTGTTCCATTGCTAATCAAGAGTACAAATGGGACACCCCACATAACATATTGTTCCCTTAGTAATCAAGAGTACAAATGGAACACCCCACATAACATATTGTTCCATTGGTAATCAAGAGTAAAAATGGAACACCCCACATAACATATTGTTCCATTGGTAATCAAGAGTACAAATGGGACACCCCACATAACATATTGTTCCCTTAGTAATCAAGAGTACAAATGGAACACCCCACATAACATATTGTTCCATTGGTAATCAAGAGTACAAATGGAACACCCCACATAACATATTGTTCCCTTAGTAATCAAGAGTACAAATGGAACACCCCACATAACATATTGTTCCCTTATTAATCAAGAGTACAAATGGAACACCCCACATAACATATTGTTCCCTTATTAATCAAGAGTACAAATGGGACACCCCACATAACATATTGTTCCATTGGTAATCAAGAGTACAAATGGGACACCCCACATAACATATTGCTGTATCTCTGAAGTTGCTTAAAAACCTGCTAAACTTTCAACAATTAACAGTGTCCTTCCTCACCAGAtctagacagggagagatgagagacgaGCATCTCCTTCCCTGGGtctagacagggagagatgagagaggagcatctccTTCCCTGGGtctagacagggagagatgagagaggagcatCTCCTTCCCTGGGtctagacagggagagatgagagaggagcatCTCCTCCTTCCCTGGGtctagacagggagaggagagagatgagcatCTCCTTCTTCCCTGGGtctagacagggagaggagagagaggagcatctCCTAACCAGCCCCCCTTGGACAATGTGGAGAGACATTAGATCCAAGTCACAAATGTTACCCTGTTCCTTATCCAGCGCAATACGTTTTGACCAGGACCAGTAGCGCACTATGtcgggaataggttgccatttgggacacaagccttCATTGCAGTACAGTAAGTGGCCCCTGGCCAGAGATTCTCCTCGTCAAACCTGCTGAGAGAAGATCAGTTTCATTTCACTGGTTCATTCATCATCTTTAATCCTTCCCCCGCCCCCCGCTCTCCTCTCACAGTCTGTGAAGATgcctcagtccccc

Function

NR:

description
PREDICTED: protocadherin gamma-A11-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120416 True 1349 lncRNA 0.44 3 3431964 3433787

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 9865 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 451771 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 453440 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1011343 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1253968 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 616996 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 632205 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 679335 4113122 ~ 4119742 (+)
deptor deptor coding downstream 803093 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 894196 4327983 ~ 4572381 (+)
G106463 NA non-coding upstream 413 3429789 ~ 3431551 (+)
G106454 e2f3 non-coding upstream 32113 3399428 ~ 3399851 (+)
G106450 NA non-coding upstream 36908 3392702 ~ 3395056 (+)
G106439 NA non-coding upstream 61872 3369635 ~ 3370092 (+)
G106466 NA non-coding downstream 1797 3435584 ~ 3436547 (+)
G106478 NA non-coding downstream 23492 3457279 ~ 3457863 (+)
G106518 NA non-coding downstream 90167 3523954 ~ 3524217 (+)
G106468 NA non-coding downstream 91336 3525123 ~ 3526728 (+)
G106470 NA non-coding downstream 97177 3530964 ~ 3531602 (+)
G106253 cdkal other upstream 40931 3006312 ~ 3391033 (+)
G106240 NA other upstream 392489 2974823 ~ 3039475 (+)
G106122 NA other upstream 713439 2717961 ~ 2718525 (+)
G106019 NA other upstream 903992 2520716 ~ 2527972 (+)
G105042 NA other upstream 1721407 1708969 ~ 1710557 (+)
G106575 NA other downstream 205647 3639434 ~ 3800352 (+)
G106595 NA other downstream 242478 3676265 ~ 3677850 (+)
G106775 NA other downstream 593288 4027075 ~ 4027594 (+)
G106814 NA other downstream 704026 4137813 ~ 4138496 (+)
G107922 NA other downstream 1310381 4744168 ~ 4745586 (+)

Expression


Co-expression Network