Gene
RNA
| Item | Value |
|---|---|
| gene id | G106478 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 3457279 ~ 3457863 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU120430 | False | 370 | lncRNA | 0.49 | 2 | 3457279 | 3457863 |
| TU120432 | True | 413 | lncRNA | 0.55 | 2 | 3457279 | 3457863 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mboat1 | LOC106573215 | coding | upstream | 35180 | 3350582 ~ 3487129 (+) |
| LOC118937337 | NA | coding | upstream | 477086 | 2978786 ~ 2980193 (+) |
| LOC118937340 | NA | coding | upstream | 478755 | 2978236 ~ 2978524 (+) |
| LOC118944030 | NA | coding | upstream | 1036658 | 2418186 ~ 2420621 (+) |
| LOC118944029 | NA | coding | upstream | 1279283 | 2166121 ~ 2177996 (+) |
| colec10 | LOC106591867 | coding | downstream | 592920 | 4050783 ~ 4065607 (+) |
| mal2 | mal2 | coding | downstream | 608129 | 4065992 ~ 4085680 (+) |
| LOC110507036 | LOC106594376 | coding | downstream | 655259 | 4113122 ~ 4119742 (+) |
| deptor | deptor | coding | downstream | 779017 | 4236880 ~ 4302536 (+) |
| col14a1a | col14a1 | coding | downstream | 870120 | 4327983 ~ 4572381 (+) |
| G106461 | NA | non-coding | upstream | 9740 | 3416549 ~ 3447539 (+) |
| G106466 | NA | non-coding | upstream | 20732 | 3435584 ~ 3436547 (+) |
| G106465 | NA | non-coding | upstream | 23492 | 3431964 ~ 3433787 (+) |
| G106463 | NA | non-coding | upstream | 25728 | 3429789 ~ 3431551 (+) |
| G106518 | NA | non-coding | downstream | 66091 | 3523954 ~ 3524217 (+) |
| G106468 | NA | non-coding | downstream | 67260 | 3525123 ~ 3526728 (+) |
| G106470 | NA | non-coding | downstream | 73101 | 3530964 ~ 3531602 (+) |
| G106520 | NA | non-coding | downstream | 79118 | 3536981 ~ 3537309 (+) |
| G106523 | NA | non-coding | downstream | 86616 | 3544479 ~ 3545128 (+) |
| G106253 | cdkal | other | upstream | 66246 | 3006312 ~ 3391033 (+) |
| G106240 | NA | other | upstream | 417804 | 2974823 ~ 3039475 (+) |
| G106122 | NA | other | upstream | 738754 | 2717961 ~ 2718525 (+) |
| G106019 | NA | other | upstream | 929307 | 2520716 ~ 2527972 (+) |
| G105042 | NA | other | upstream | 1746722 | 1708969 ~ 1710557 (+) |
| G106575 | NA | other | downstream | 181571 | 3639434 ~ 3800352 (+) |
| G106595 | NA | other | downstream | 218402 | 3676265 ~ 3677850 (+) |
| G106775 | NA | other | downstream | 569212 | 4027075 ~ 4027594 (+) |
| G106814 | NA | other | downstream | 679950 | 4137813 ~ 4138496 (+) |
| G107922 | NA | other | downstream | 1286305 | 4744168 ~ 4745586 (+) |
