G107316


Basic Information

Item Value
gene id G107316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3569469 ~ 3572630 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU121660
ctggatggCCAGAAACAagaaactttcttctgaaactcatcagtctattcttgttctgagaaatgaaggctattcctgtcacaccctgaccatagtttactttgtatatttctatgttgtggttggtcagggtgtgatctgagtgggcattctatgtttcatgtctagtttgtctagttctatgttcggcctgatatggttctcaatcagaggcaggtgttcgtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctttgtgtttacaCCAGattgggctgttttgagttctcacgtttcttgttttcgttagtttgttcatgtatagtgtcttcattaaactacaatgaacaaccaccacgctgcgttttggtccgcctctactccacaacaagagaaccgttacaattccatgtgagaaattgccaagaaactgaagatctcgtacaacgctgtgtactactcccttcacagaacagcgcaaactggctctaaccagaatagaaagaggagtgggaggccccggtgcacaactgaacaagaggacaagtacattagaatgtctagtttgagaaacagacgcctcacaagtcctcaactgacagcttcatttaatagtacccgcaaaaacaccagtctcaacgtcaacagcgaagaggcgactccgggatgctggccttctaggtagagttgcaaagaaaaagccatatctcagactggccaataaaaagccatatctcagactggccaataaaaagccatatAATTAAGACGGGCAAAAGAAcagagacactggacagaggaacaaggacatttataagtgaccccaaacttttgaaaggtagcgTGTGTGTTTTAGTTGTCTTCCTTGGAGAGAGGGCTGCTCTACTCACCTGGAACCTATGTTGTTTGGTATGATGTTTTCAACAGGCCCCAGACTTAGAGGGACAACTGGGATTCTGGGACATTTTATCAGTCAAATGAAGATAAGGGACTGAGGATAATCTCAGacttggagggaggggggggggggggggagaggtaaTGTACAGAGCTAACAGTAACAGAGAGGGAATGGACTCACAACTGCAGCCTCTCACTGAATATTTATGATTTCATACTGTATCGTATGAAAGGAGTTCACTCTCTAGTTGAATATTTATGATTCTATACTGTAGTTCACTCTAGTTTAATATTTATGATTCTATGCTGTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121660 True 1256 lncRNA 0.34 4 3569469 3572630

Neighbor

gene id symbol gene type direction distance location
LOC110514058 LOC105007466 coding downstream 48700 3447157 ~ 3520769 (-)
LOC118944031 NA coding downstream 125928 3441086 ~ 3443541 (-)
LOC118937342 e2f3 coding downstream 164357 3392063 ~ 3405112 (-)
cdkal1 cdkal coding downstream 178457 2644890 ~ 3391012 (-)
LOC110511524 NA coding downstream 1033307 2533802 ~ 2536162 (-)
LOC118937345 NA coding upstream 42453 3615083 ~ 3619295 (-)
LOC118937344 NA coding upstream 63016 3635646 ~ 3637696 (-)
LOC118937343 NA coding upstream 68664 3641294 ~ 3643287 (-)
LOC110505062 LOC106572986 coding upstream 103635 3676265 ~ 3701014 (-)
LOC110506994 carmil1 coding upstream 132406 3705036 ~ 3924570 (-)
G107315 NA non-coding downstream 2824 3566272 ~ 3566645 (-)
G107254 NA non-coding downstream 42666 3524614 ~ 3526803 (-)
G107306 NA non-coding downstream 55481 3513513 ~ 3513988 (-)
G107303 NA non-coding downstream 63456 3504981 ~ 3506013 (-)
G107282 NA non-coding downstream 113177 3455423 ~ 3456292 (-)
G107323 NA non-coding upstream 19357 3591987 ~ 3593189 (-)
G107342 NA non-coding upstream 113992 3686622 ~ 3686950 (-)
G107357 NA non-coding upstream 155866 3728496 ~ 3730386 (-)
G106003 NA other downstream 1084346 2483860 ~ 2485123 (-)
G106001 NA other downstream 1086113 2482941 ~ 2483356 (-)
G105938 NA other downstream 1205938 2362999 ~ 2363531 (-)
G105636 NA other downstream 1448968 2118079 ~ 2120501 (-)
G105492 NA other downstream 1607882 1958484 ~ 1961587 (-)
G107456 NA other upstream 418696 3991326 ~ 3992847 (-)
G107574 NA other upstream 722795 4295425 ~ 4296815 (-)
G107576 NA other upstream 724815 4297445 ~ 4302456 (-)
G107755 NA other upstream 803292 4375922 ~ 4376423 (-)

Expression


Co-expression Network