G106535


Basic Information

Item Value
gene id G106535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3576080 ~ 3576784 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120511
GCCTCTCATAGCATAGGGCACAGGGCCTCTCATAGCATAGGGCACAGGGCCTCTCATAGCATAGGGCACAGGGCCTCTCATAGCATAGGGCACAGGGCCTCTCATAGGAGAGACTAGAAAAGTGTGTATTGGTTCAATCTTATAGAAAAACTAAACGTTTAGGATTGCTAGTTCAGTGTTTCAGGTAGTTTTGGTCATTTTGGCTAACTAGTTCAGTGTGGTTTTGATCAAAACATTTAGGATAGCTAGGTCAGTGTTTCAGGTGATTTTAATTAAGGCGTTTAAGTTCAGGTGGTTTTGATTTTTGACATTTAGACTAGCTAGTTCAGTGGTTTTGGTCATTTAGTTAGCTACTTCAGGGTTTCAGGTAGTTTTGGTCATTTAGTTAGCTACTTCAGGGTTTCAGGTGTTTTGATCAAGACATTTAGGCTAGCTAGTTTAGTGTTTCTGCAGGTTTTGATAATTTAGGCTAGCTATATCATTGTTTCAGGTGGCTTTAAACAAGACATTTAGGCTAGCTAGTTTCCTGTTCCAGCTGGTTTTTATCAAGACATTTAGGTCAGCTAGTTCAGTGTTACAGCTGGTTTTGATCAAGACATTTAGACTAGCTAGTTCAGTGTTACAGCTGGTTTTTATCAAGACATTTAGACTAGCTAGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120511 True 660 lncRNA 0.37 2 3576080 3576784

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 153981 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 595887 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 597556 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1155459 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1398084 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 473999 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 489208 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 536338 4113122 ~ 4119742 (+)
deptor deptor coding downstream 660096 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 751199 4327983 ~ 4572381 (+)
G106522 NA non-coding upstream 27011 3544715 ~ 3549069 (+)
G106523 NA non-coding upstream 30952 3544479 ~ 3545128 (+)
G106520 NA non-coding upstream 38771 3536981 ~ 3537309 (+)
G106470 NA non-coding upstream 44478 3530964 ~ 3531602 (+)
G106468 NA non-coding upstream 49352 3525123 ~ 3526728 (+)
G106543 NA non-coding downstream 15255 3592039 ~ 3593732 (+)
G106551 NA non-coding downstream 27762 3604546 ~ 3605227 (+)
G106555 NA non-coding downstream 32326 3609110 ~ 3609738 (+)
G106564 NA non-coding downstream 49742 3626526 ~ 3627642 (+)
G106568 NA non-coding downstream 54840 3631624 ~ 3632148 (+)
G106253 cdkal other upstream 185047 3006312 ~ 3391033 (+)
G106240 NA other upstream 536605 2974823 ~ 3039475 (+)
G106122 NA other upstream 857555 2717961 ~ 2718525 (+)
G106019 NA other upstream 1048108 2520716 ~ 2527972 (+)
G106575 NA other downstream 62650 3639434 ~ 3800352 (+)
G106595 NA other downstream 99481 3676265 ~ 3677850 (+)
G106775 NA other downstream 450291 4027075 ~ 4027594 (+)
G106814 NA other downstream 561029 4137813 ~ 4138496 (+)
G107922 NA other downstream 1167384 4744168 ~ 4745586 (+)

Expression


Co-expression Network