G106555


Basic Information

Item Value
gene id G106555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3609110 ~ 3609738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120547
tagtagtagtagtagtagcaatagtagtaccattagcagtagtagtagtaccattacttgtagtagttgtggtggtaccattagtattagtagtagtagtagtaccattaGTAGTAGtaccattagtagtagtagtaccattagtagtaccagtagtagtaccattagtagtagtagtagtgccaccattagtagtagtagtagtaccaccattagtagtagtagtagtagtagtagtaccagtagtagtagtagtagtagtagtagtagtagtaccattagtagtagtaccagtagtagtaccagtgcgagtagtagtaccagtagtagtagcagtagttccagtagtagtaccagtagtagtagcagtagtaccattagtagtagtaccagtagtagtagcagtagtaccagtagtagtaccagtagtagcaccagtagtagtagtagtaccaccagtagtagtagtagtaccagtaccagtagtagtagtagtagcagcagtaccagtagcagtagtaccagtagtagtagcagtagtaccagtagtagtaccagtagtagtaccagtagtagtaccattagtagtagtagtagtagtagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120547 True 605 lncRNA 0.39 2 3609110 3609738

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 187011 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 628917 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 630586 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1188489 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1431114 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 441045 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 456254 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 503384 4113122 ~ 4119742 (+)
deptor deptor coding downstream 627142 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 718245 4327983 ~ 4572381 (+)
G106551 NA non-coding upstream 3883 3604546 ~ 3605227 (+)
G106543 NA non-coding upstream 15378 3592039 ~ 3593732 (+)
G106535 NA non-coding upstream 32326 3576080 ~ 3576784 (+)
G106522 NA non-coding upstream 60041 3544715 ~ 3549069 (+)
G106523 NA non-coding upstream 63982 3544479 ~ 3545128 (+)
G106564 NA non-coding downstream 16788 3626526 ~ 3627642 (+)
G106568 NA non-coding downstream 21886 3631624 ~ 3632148 (+)
G106572 NA non-coding downstream 25902 3635640 ~ 3636535 (+)
G106573 NA non-coding downstream 27077 3636815 ~ 3638985 (+)
G106574 NA non-coding downstream 29300 3639038 ~ 3640178 (+)
G106253 cdkal other upstream 218077 3006312 ~ 3391033 (+)
G106240 NA other upstream 569635 2974823 ~ 3039475 (+)
G106122 NA other upstream 890585 2717961 ~ 2718525 (+)
G106019 NA other upstream 1081138 2520716 ~ 2527972 (+)
G106575 NA other downstream 29696 3639434 ~ 3800352 (+)
G106595 NA other downstream 66527 3676265 ~ 3677850 (+)
G106775 NA other downstream 417337 4027075 ~ 4027594 (+)
G106814 NA other downstream 528075 4137813 ~ 4138496 (+)
G107922 NA other downstream 1134430 4744168 ~ 4745586 (+)

Expression


Co-expression Network