G106572


Basic Information

Item Value
gene id G106572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3635640 ~ 3636535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120565
CCTGGATTTACACAACGGAAGTGTTAACAAGTGTCATCCTTTAAATCACATCTGTGAACATCCAATTTAACAGTTAACAAATTGATTGTAAACCATCTTATTCAAGGGAAACAGCCCAGAACTCTTCTAACTAAGGTAAAGTGGGAGAGTTGAAAAGGCTGATGGActtggagaacaggagagagagtgaaaaccCTGGCTGGATATCAAGGTGGTGAGTGACTGGATGAAGgtgaagaaacacaaacagcaGAGGATTCTACTAACATTATAAAACTGTGACTCACACACAGCAGCTGACACGGCCAAGGCAAACAGAAGAGTTCCACTCCTGCCGTCGCAGAGCCTCTTATTTCATCATTCAACATACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCATCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCATCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACTAGATCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACT

Function

NR:

description
PREDICTED: lissencephaly-1 homolog A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120565 True 655 lncRNA 0.38 2 3635640 3636535

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 213541 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 655447 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 657116 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1215019 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1457644 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 414248 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 429457 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 476587 4113122 ~ 4119742 (+)
deptor deptor coding downstream 600345 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 691448 4327983 ~ 4572381 (+)
G106568 NA non-coding upstream 3492 3631624 ~ 3632148 (+)
G106564 NA non-coding upstream 7998 3626526 ~ 3627642 (+)
G106555 NA non-coding upstream 25902 3609110 ~ 3609738 (+)
G106551 NA non-coding upstream 30413 3604546 ~ 3605227 (+)
G106543 NA non-coding upstream 41908 3592039 ~ 3593732 (+)
G106573 NA non-coding downstream 280 3636815 ~ 3638985 (+)
G106574 NA non-coding downstream 2503 3639038 ~ 3640178 (+)
G106578 NA non-coding downstream 6880 3643415 ~ 3645104 (+)
G106579 NA non-coding downstream 8952 3645487 ~ 3648411 (+)
G106590 NA non-coding downstream 26282 3662817 ~ 3663360 (+)
G106253 cdkal other upstream 244607 3006312 ~ 3391033 (+)
G106240 NA other upstream 596165 2974823 ~ 3039475 (+)
G106122 NA other upstream 917115 2717961 ~ 2718525 (+)
G106019 NA other upstream 1107668 2520716 ~ 2527972 (+)
G106575 NA other downstream 2899 3639434 ~ 3800352 (+)
G106595 NA other downstream 39730 3676265 ~ 3677850 (+)
G106775 NA other downstream 390540 4027075 ~ 4027594 (+)
G106814 NA other downstream 501278 4137813 ~ 4138496 (+)
G107922 NA other downstream 1107633 4744168 ~ 4745586 (+)

Expression


Co-expression Network