G106573


Basic Information

Item Value
gene id G106573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3636815 ~ 3638985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120566
TCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCATCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCATCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCATCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTTTCAACTAGACAGTCCACCTCCTCTACCATGTGACAGGGTATCAACTAGATCAACTAGACAGTCCACCTCCTCTACCATGTGGCCAGGGTTTCAACTTTCTGTTGACAGGATGTGACTCATCTTTGCTCATGCTATGAAGCTGTGAAAACAGTGTGGGTATGGAAAACATGGTGAGTCTTAAAGGTGGGAGTAAAACCTAGAATATTGCTTTGGGAAACAACACAAACCCTCACAGTGGTAAAGAGAGATAAACACTCCCTTTAAAGAGGAGCCAGTTAAGAGAAAAGTAAACTACACTTGAATGTCTTTTTCAGACTACTAAACAACCCCTTGTACTTATACGTAAGCctgaacagaacaacagaacagaagagaagagaacagaacagaacacaacagaacagaagagaacagaacagaatagaagagaacagaacacaacacaacagaacagaagagaacagaacacaacagaacagaagagaacagaacacaacagaacagaagagaacagaacacaacagaacagaagagaacagatcAGAACACAACAGAAGAGAATAGATCAGAAcacaacagaagagaacagaacacaacagaacagaacagaacacaacacaacagaagagaacagaacaacagaacagaagagaacagaacaggacagaagagaacagaacacaacacaacataacagaagagaacagaacagaacagaagagaacagaacagaacagaacagaagagaacagaacagaagagaacagaacaacacCTGCCCTCAGGTAAACCCTCTGACTGATCCAATCAAAGCCGGAGTGTTACTGTACCCATCTGTCCATGAAAGGTGACTACAATAAACCTTGGCACATTAAACACAGTAATACTTGAATGCAAACGGTTGTTCTTTGTGAGGATCGTTTAATTTACATTCTTATTACTTCAGGAGGCTCTGAGTCGGAAAGCTGTGTCGACTTTACATTCTTGGGGAAATAAAAATGTTGACAACAATGTCTTTTTTCAATCCAACCTTACTTCCCGTAGTTTAAACCTCTCCAAATAAGATGATAACAGGTGTAGGCCTATATACTCTATATCTAACCTCAACACCATCAACCACTCATttcatattaaactatattttTACATGAGTTTATGAGGTCACATTCCTGTCTCAATAAAGTATCTTGTAAAATCTGAACGAACATCAATATGGGACTAATATTGACGTACTGCAAGCCCACAACATGAAGACTGTATCTCATCTGCAGTCGTCTGTCACCAGTCCAAGTCTGGGAGGAAATAGATGAAATGATAagatcataaaaataaaaaaaattgaaaaaaacttTATTGATGTCTTTAATTCGTGCCAAAAATCGTGTGAGGCGCAACAACGCTATTGAAAACATTTGATGAGTGTAAAGCAGGTGTGTACAGGTTATAACTCACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120566 True 1796 lncRNA 0.41 3 3636815 3638985

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 214716 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 656622 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 658291 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1216194 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1458819 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 411798 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 427007 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 474137 4113122 ~ 4119742 (+)
deptor deptor coding downstream 597895 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 688998 4327983 ~ 4572381 (+)
G106572 NA non-coding upstream 280 3635640 ~ 3636535 (+)
G106568 NA non-coding upstream 4667 3631624 ~ 3632148 (+)
G106564 NA non-coding upstream 9173 3626526 ~ 3627642 (+)
G106555 NA non-coding upstream 27077 3609110 ~ 3609738 (+)
G106551 NA non-coding upstream 31588 3604546 ~ 3605227 (+)
G106574 NA non-coding downstream 53 3639038 ~ 3640178 (+)
G106578 NA non-coding downstream 4430 3643415 ~ 3645104 (+)
G106579 NA non-coding downstream 6502 3645487 ~ 3648411 (+)
G106590 NA non-coding downstream 23832 3662817 ~ 3663360 (+)
G106595 NA non-coding downstream 37280 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 245782 3006312 ~ 3391033 (+)
G106240 NA other upstream 597340 2974823 ~ 3039475 (+)
G106122 NA other upstream 918290 2717961 ~ 2718525 (+)
G106019 NA other upstream 1108843 2520716 ~ 2527972 (+)
G106575 NA other downstream 449 3639434 ~ 3800352 (+)
G106775 NA other downstream 388090 4027075 ~ 4027594 (+)
G106814 NA other downstream 498828 4137813 ~ 4138496 (+)
G107922 NA other downstream 1105183 4744168 ~ 4745586 (+)

Expression


Co-expression Network