Gene
RNA
| Item | Value |
|---|---|
| gene id | G106590 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 3662817 ~ 3663360 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU120589 | True | 522 | lncRNA | 0.43 | 2 | 3662817 | 3663360 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mboat1 | LOC106573215 | coding | upstream | 240718 | 3350582 ~ 3487129 (+) |
| LOC118937337 | NA | coding | upstream | 682624 | 2978786 ~ 2980193 (+) |
| LOC118937340 | NA | coding | upstream | 684293 | 2978236 ~ 2978524 (+) |
| LOC118944030 | NA | coding | upstream | 1242196 | 2418186 ~ 2420621 (+) |
| LOC118944029 | NA | coding | upstream | 1484821 | 2166121 ~ 2177996 (+) |
| colec10 | LOC106591867 | coding | downstream | 387423 | 4050783 ~ 4065607 (+) |
| mal2 | mal2 | coding | downstream | 402632 | 4065992 ~ 4085680 (+) |
| LOC110507036 | LOC106594376 | coding | downstream | 449762 | 4113122 ~ 4119742 (+) |
| deptor | deptor | coding | downstream | 573520 | 4236880 ~ 4302536 (+) |
| col14a1a | col14a1 | coding | downstream | 664623 | 4327983 ~ 4572381 (+) |
| G106579 | NA | non-coding | upstream | 14406 | 3645487 ~ 3648411 (+) |
| G106578 | NA | non-coding | upstream | 17713 | 3643415 ~ 3645104 (+) |
| G106574 | NA | non-coding | upstream | 22639 | 3639038 ~ 3640178 (+) |
| G106573 | NA | non-coding | upstream | 23832 | 3636815 ~ 3638985 (+) |
| G106572 | NA | non-coding | upstream | 26282 | 3635640 ~ 3636535 (+) |
| G106595 | NA | non-coding | downstream | 12905 | 3676265 ~ 3677850 (+) |
| G106597 | NA | non-coding | downstream | 18537 | 3681897 ~ 3682180 (+) |
| G106602 | NA | non-coding | downstream | 31371 | 3694731 ~ 3812426 (+) |
| G106611 | NA | non-coding | downstream | 41143 | 3704503 ~ 3704936 (+) |
| G106616 | NA | non-coding | downstream | 51851 | 3715211 ~ 3715836 (+) |
| G106253 | cdkal | other | upstream | 271784 | 3006312 ~ 3391033 (+) |
| G106240 | NA | other | upstream | 623342 | 2974823 ~ 3039475 (+) |
| G106122 | NA | other | upstream | 944292 | 2717961 ~ 2718525 (+) |
| G106019 | NA | other | upstream | 1134845 | 2520716 ~ 2527972 (+) |
| G106775 | NA | other | downstream | 363715 | 4027075 ~ 4027594 (+) |
| G106814 | NA | other | downstream | 474453 | 4137813 ~ 4138496 (+) |
| G107922 | NA | other | downstream | 1080808 | 4744168 ~ 4745586 (+) |
| G107955 | LOC106592862 | other | downstream | 1145379 | 4808739 ~ 4811575 (+) |
