G106597


Basic Information

Item Value
gene id G106597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3681897 ~ 3682180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120634
GTGTTACTCTGACCAATGGAGAAGAGAGAACATAGAACTCATTAAAAGCTCTGGTGTTACTCTGACCAATGGAGAAGAGAGAACATAGAACTCATTAAAAGCTCTGGTGTTACTCTGACCAATGGGGAAGAGAGAACATAGAACTCATTAAAAGCTCCGGTGTTACTCTGACCAATGGAGAAGAGAGAACATAGAACTCATTAACAGCTCCGGTGTTACTCTGAccaatgg

Function

NR:

description
PREDICTED: secretagogin-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120634 True 231 lncRNA 0.42 2 3681897 3682180

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 259798 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 701704 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 703373 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1261276 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1503901 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 368603 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 383812 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 430942 4113122 ~ 4119742 (+)
deptor deptor coding downstream 554700 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 645803 4327983 ~ 4572381 (+)
G106595 NA non-coding upstream 4047 3676265 ~ 3677850 (+)
G106590 NA non-coding upstream 18537 3662817 ~ 3663360 (+)
G106579 NA non-coding upstream 33486 3645487 ~ 3648411 (+)
G106578 NA non-coding upstream 36793 3643415 ~ 3645104 (+)
G106574 NA non-coding upstream 41719 3639038 ~ 3640178 (+)
G106602 NA non-coding downstream 12551 3694731 ~ 3812426 (+)
G106611 NA non-coding downstream 22323 3704503 ~ 3704936 (+)
G106616 NA non-coding downstream 33031 3715211 ~ 3715836 (+)
G106617 NA non-coding downstream 34822 3717002 ~ 3721341 (+)
G106625 NA non-coding downstream 44637 3726817 ~ 3728882 (+)
G106253 cdkal other upstream 290864 3006312 ~ 3391033 (+)
G106240 NA other upstream 642422 2974823 ~ 3039475 (+)
G106122 NA other upstream 963372 2717961 ~ 2718525 (+)
G106775 NA other downstream 344895 4027075 ~ 4027594 (+)
G106814 NA other downstream 455633 4137813 ~ 4138496 (+)
G107922 NA other downstream 1061988 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 1126559 4808739 ~ 4811575 (+)
G108048 NA other downstream 1175731 4857911 ~ 4858274 (+)

Expression


Co-expression Network