G106611


Basic Information

Item Value
gene id G106611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3704503 ~ 3704936 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120652
ATTCAACACTGATCCAACGATCAATGTTTCAACGATCAATGTGTCAACACTGATTCAACGATCAATGTTTCAACGATCAATGTCAACACTGATTCAACGATCAATGATTCAACGATCAATGTCAACACTGATTCAACGATCAATGTTTCAACGATCAATGTCAACACTGATTCAACGATCAATGTTTCAACGATCAATGTCAACACTGATTCAGCGATCAATGTTTCAACGATCAATGTCAACACTGATTCAACGATCAATGTTTCAACGATCAATGTCAACACTGATTCAACGATCAATGTTTCAACGATCAATGTCAACAC

Function

NR:

description
Pol-RFamide neuropeptide

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120652 True 323 lncRNA 0.37 2 3704503 3704936

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 282404 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 724310 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 725979 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1283882 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1526507 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 345847 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 361056 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 408186 4113122 ~ 4119742 (+)
deptor deptor coding downstream 531944 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 623047 4327983 ~ 4572381 (+)
G106597 NA non-coding upstream 22323 3681897 ~ 3682180 (+)
G106595 NA non-coding upstream 26653 3676265 ~ 3677850 (+)
G106590 NA non-coding upstream 41143 3662817 ~ 3663360 (+)
G106579 NA non-coding upstream 56092 3645487 ~ 3648411 (+)
G106578 NA non-coding upstream 59399 3643415 ~ 3645104 (+)
G106616 NA non-coding downstream 10275 3715211 ~ 3715836 (+)
G106617 NA non-coding downstream 12066 3717002 ~ 3721341 (+)
G106625 NA non-coding downstream 21881 3726817 ~ 3728882 (+)
G106630 NA non-coding downstream 36653 3741589 ~ 3742013 (+)
G106642 NA non-coding downstream 58951 3763887 ~ 3764447 (+)
G106253 cdkal other upstream 313470 3006312 ~ 3391033 (+)
G106240 NA other upstream 665028 2974823 ~ 3039475 (+)
G106122 NA other upstream 985978 2717961 ~ 2718525 (+)
G106775 NA other downstream 322139 4027075 ~ 4027594 (+)
G106814 NA other downstream 432877 4137813 ~ 4138496 (+)
G107922 NA other downstream 1039232 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 1103803 4808739 ~ 4811575 (+)
G108048 NA other downstream 1152975 4857911 ~ 4858274 (+)

Expression


Co-expression Network