G106642


Basic Information

Item Value
gene id G106642
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3763887 ~ 3764447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120695
aaaacacactgtgttgcaataaaggtctacagtagcctcagcagcactctgtatggtagcaccatggtgtagccggaggacagctagcttcaaccctcctctgggtacattgacttcaatacaaatcctaggaggctcatggttctcacccccttccatagacttacacagcaaTTATGACAACTttcggaggatgtcctccaacctatcagagctcttgcagcatgaactgacatgttgcctACCCAATCAtaagatcagagaatgaatctagtactgaaagcataagctacagctagctagcgctgcagtgcataacatgatgaatctagtactgaaagcataagctacagctagctagcgctgcagtgcataacatgatgaatctagtactgaaagcataagctacagctagctagcactgcagtgcattaCATGTGgtaagtagttgactcaaagagaaagacaatagttgaacagttttgaacaaactTAATTTCTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120695 True 503 lncRNA 0.43 2 3763887 3764447

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 341788 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 783694 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 785363 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1343266 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1585891 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 286336 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 301545 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 348675 4113122 ~ 4119742 (+)
deptor deptor coding downstream 472433 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 563536 4327983 ~ 4572381 (+)
G106630 NA non-coding upstream 21874 3741589 ~ 3742013 (+)
G106625 NA non-coding upstream 35005 3726817 ~ 3728882 (+)
G106617 NA non-coding upstream 42546 3717002 ~ 3721341 (+)
G106616 NA non-coding upstream 48051 3715211 ~ 3715836 (+)
G106611 NA non-coding upstream 58951 3704503 ~ 3704936 (+)
G106645 NA non-coding downstream 11668 3776115 ~ 3776747 (+)
G106647 NA non-coding downstream 15243 3779690 ~ 3781177 (+)
G106649 NA non-coding downstream 31779 3796226 ~ 3798842 (+)
G106654 NA non-coding downstream 42177 3806624 ~ 3808552 (+)
G106656 NA non-coding downstream 48080 3812527 ~ 3816515 (+)
G106595 NA other upstream 86037 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 372854 3006312 ~ 3391033 (+)
G106240 NA other upstream 724412 2974823 ~ 3039475 (+)
G106122 NA other upstream 1045362 2717961 ~ 2718525 (+)
G106775 NA other downstream 262628 4027075 ~ 4027594 (+)
G106814 NA other downstream 373366 4137813 ~ 4138496 (+)
G107922 NA other downstream 979721 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 1044292 4808739 ~ 4811575 (+)
G108048 NA other downstream 1093464 4857911 ~ 4858274 (+)

Expression


Co-expression Network