XLOC_020815



Basic Information


Item Value
gene id XLOC_020815
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 6243742 ~ 6246739 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042321
CAGAGCACAGCTCCAATCAGTGCAGCAGCGGCAGCACAGATCAACACAATGCCATATAAAGCATGTTCAGTTGTGATGTtcgtgatggtcagagatccagtgtTGCTGTCCAGCatcagtctgtctctgaatctccTGTCCGGACCATCGTATGTGGAGAAGATTTTAGCCTCGCCGCTGATTTCAGCAATCAGAGAGTGTCCATCTCCAAAGCTCCACtgtacatcatcatcatcgtgtATTTCGGTAACACCAGTGCTTAGAGTCACAGAACGGTCCTCTAATACTGAAACCGACTTAACAAacacacctggggcctgtttcagaaaggaggttaagtgaaaactcagagtattttaaccccgaaatgagagaaactctgagttttccgtttcaaaatggcaggtttgttcaactcaagaaagcagggtaagtcaagcctgtttctgaaagaaaggtaactttaactcgagagtcagttact

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042321 True 484 lncRNA 0.45 2 6243742 6246739

Neighbor


gene id symbol gene type direction distance location
XLOC_020814 AL928685.4 coding downstream 6349 6232552 ~ 6237393 (-)
XLOC_020813 si:ch211-274k16.2 coding downstream 14467 6211114 ~ 6229275 (-)
XLOC_020812 si:rp71-36a1.5 coding downstream 49162 6182981 ~ 6194580 (-)
XLOC_020811 BX004840.2 coding downstream 67483 6170371 ~ 6176259 (-)
XLOC_020810 NA coding downstream 75790 6154675 ~ 6167952 (-)
XLOC_020816 AL928685.1 coding upstream 26842 6273581 ~ 6282189 (-)
XLOC_020817 si:ch211-274k16.9 coding upstream 37299 6284038 ~ 6287488 (-)
XLOC_020818 AL928685.2 coding upstream 53572 6300311 ~ 6316979 (-)
XLOC_020819 zgc:113298 coding upstream 96042 6342781 ~ 6362472 (-)
XLOC_020820 si:rp71-1i20.2 coding upstream 146488 6393227 ~ 6404910 (-)
XLOC_020808 BX004840.1 non-coding downstream 155985 6085307 ~ 6087757 (-)
XLOC_020806 NA non-coding downstream 176875 6064870 ~ 6066867 (-)
XLOC_020805 CU468041.1 non-coding downstream 197147 6044172 ~ 6046595 (-)
XLOC_020821 NA non-coding upstream 150674 6397413 ~ 6399717 (-)
XLOC_020825 CR926879.1 non-coding upstream 229403 6476142 ~ 6476258 (-)
XLOC_020827 CR352226.4 non-coding upstream 268658 6515397 ~ 6520026 (-)

Expression



Co-expression Network