G106649


Basic Information

Item Value
gene id G106649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3796226 ~ 3798842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120704
TTATTATGGTGTATATAAACCCAGTAGCCCTGATATGGATACATTATTATGGTGTATATAAACCCAGTAGCCCTGATATGGCTACATTATTATGGTGTATATAAACCCAGTAGCCCTGATATGGATACAGTCTTCATTATTATGGTGTATATAAACCCAGTAGCCCTGATATGGTTACAGTCTTCATTATTATGGTGTATATAAACCCAGTAGCCCTGATATGGTTACAGTCTTCATTATTATGGTGTATATAAACCCAGTAGCCCTGATATGGATACATTATTATGGTGTATATAAACCCAGTAGCCCTGATATGGCTACAGTCTTCATTATTATGGTGTATATAAAGTCAGTAGAATCCTTTTTATAAAACACAGCAGCTTGTCCTCCACTCCCACACCCTCCCTTATAgGCTAGCTCTGTCCCCAGAGAGACTGTGATAGGCTAGCTCTGTCCCCAGAGAGACTGTGATAGGCTAGTTCTGTCCCCAGAGAGACTGTGATAGGCTAGCTCTGTCCCCAGAGAGACACTGTGATAGGCTAGCTCTGTCCCCAGAGAGACACTGTGATGGGGTAATGATGTGAAGAGAGACACTGTGATGGGGTAATGATGTGAGGAGAGACACTGTGATGGGGTAATGATGTGAGGAGAGACACTGTGATGGGGTAATGATGTGAGAGACACTGTGATGGGGTAATGATGTGAGGAGAGACACTGTGATGGGGTAATGATGTGAGGAGAGACACTGTGACGGGGTAATGATGTGAGAGACTGTGATGGGGTAATGATGTGAGAGACTGTGATGGGGTAATGATGTGAGAGGCTGTGATGGGGTAATGATGTGAGAGACTGTGATGGGGTAATGATgtgaggagagactgatgggtAATACAgatttaaacaaacaaacatctcTATCCTTGAACCATTACCCACTACTACTGTAGTCAATCTGACTGATCTGCAAAGAGGGTACTCTGTCTACAAATCAATCTCCAGGTGTTTGACAAATAAGAAATAGAACACTGAGAATAGAACACTGAGAATAGAACACTGAGAATAGAACACTGAGAACAGAACACTGAGAACAGAACACTGAGAATAGAACACTGAATAATGGATCTAACATGCACTGTACATCATTAGTGATGTCCGATATGTTCTGTTCAGTTCAGTGAGGACAGGATGTAGTTTCACAGTAATCATATGGTCTGTTCAGTTCAGTGAGGACAGGATGTAGTTTCACAGTAATCATATGGTCTGCTCAGTTCAGTGAGGACAGGATGTAGTTTCACAGTAATCCTTTTCTGGTTACCATACCTCTATTTCCCCCAATCTAGAGAGAAGCCTTCCTACCCATTGAACCTGACACTGATATCAATACACTAACATCAACAAGGGCAGTCCAGGCTGACATTACATTCAGCAGAGCAGAGTCAGAGTTTTACTGTGCTGCCTGACCTCAGTGACCTCCTAAAGAGTGATGCATCAGGGGTCAAATGTCAGGGGTCAAATGTCCGCTGACGGATGGCCATCATCATGTAGCCCAAGGAATTGACTCTTCTCCTCCTGTAATTTGGAGATTGAAAATTGCTCACAGAACTATTCTAACCAAAGTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120704 True 1622 lncRNA 0.43 7 3796226 3798842

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 374127 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 816033 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 817702 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1375605 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1618230 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 251941 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 267150 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 314280 4113122 ~ 4119742 (+)
deptor deptor coding downstream 438038 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 529141 4327983 ~ 4572381 (+)
G106647 NA non-coding upstream 15049 3779690 ~ 3781177 (+)
G106645 NA non-coding upstream 19479 3776115 ~ 3776747 (+)
G106642 NA non-coding upstream 31779 3763887 ~ 3764447 (+)
G106630 NA non-coding upstream 54213 3741589 ~ 3742013 (+)
G106625 NA non-coding upstream 67344 3726817 ~ 3728882 (+)
G106654 NA non-coding downstream 7782 3806624 ~ 3808552 (+)
G106656 NA non-coding downstream 13685 3812527 ~ 3816515 (+)
G106659 NA non-coding downstream 20947 3819789 ~ 3822277 (+)
G106664 NA non-coding downstream 33988 3832830 ~ 3833410 (+)
G106671 NA non-coding downstream 41247 3840089 ~ 3840777 (+)
G106595 NA other upstream 118376 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 405193 3006312 ~ 3391033 (+)
G106240 NA other upstream 756751 2974823 ~ 3039475 (+)
G106122 NA other upstream 1077701 2717961 ~ 2718525 (+)
G106775 NA other downstream 228233 4027075 ~ 4027594 (+)
G106814 NA other downstream 338971 4137813 ~ 4138496 (+)
G107922 NA other downstream 945326 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 1009897 4808739 ~ 4811575 (+)
G108048 NA other downstream 1059069 4857911 ~ 4858274 (+)

Expression


Co-expression Network