G107375


Basic Information

Item Value
gene id G107375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3799888 ~ 3833366 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU121770
CATCCCTCACTGTACTGTGTGTTAGTATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTGTGTTAGTATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTgggtgttaaccccggtgtcctggctaaa
>TU121771
gctacagaaacaggagatagactagtgtcctgtccagggggtgtcctggtacatcaagctgctacagaaacaggagatagactagtgtcctgtccagggggtgtactggtacatcaagctgtgtGTTAGTATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTGTGTTAGTATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTgggtgttaaccccggtgtcctggctaaa
>TU121769
CATCCCTCACTGTACTGTGTGTTAGTATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTGTGTTAGTATCCCTCACTGTACTGTGTGTTAGCATCCCTCACTGTACTGTGTTAACATCCCTCACTGTACTGTGTTAACATCCTTCAGTCTAACATGAGAACCAGTATTCTGATGTCCACTGTGACCTCCTGTCCTTTACTCTGAGCACACctactatctctttctctctcactttctctctctgctgtctctctctctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121770 False 196 lncRNA 0.48 3 3799888 3833166
TU121771 False 275 lncRNA 0.49 3 3799888 3833366
TU121769 True 321 lncRNA 0.46 2 3832823 3833166

Neighbor

gene id symbol gene type direction distance location
LOC110505062 LOC106572986 coding downstream 98874 3676265 ~ 3701014 (-)
LOC110512975 LOC105909030 coding downstream 136485 3527370 ~ 3663403 (-)
LOC110506163 LOC106574253 coding upstream 97268 3930634 ~ 3933620 (-)
LOC110520706 LOC106574239 coding upstream 107024 3940390 ~ 3987636 (-)
enpp2 LOC106573026 coding upstream 288944 4122310 ~ 4167024 (-)
taf2 LOC106572977 coding upstream 337377 4170743 ~ 4223204 (-)
dscc1 LOC106595460 coding upstream 393916 4227282 ~ 4236792 (-)
G107374 NA non-coding downstream 412 3799009 ~ 3799476 (-)
G107373 NA non-coding downstream 1728 3796611 ~ 3798160 (-)
G107368 NA non-coding downstream 36807 3762545 ~ 3763081 (-)
G107362 NA non-coding downstream 44322 3755148 ~ 3755566 (-)
G107359 NA non-coding downstream 61905 3736279 ~ 3737983 (-)
G107385 NA non-coding upstream 907 3834273 ~ 3834753 (-)
G107388 NA non-coding upstream 12078 3845444 ~ 3845721 (-)
G107390 NA non-coding upstream 16042 3849408 ~ 3849949 (-)
G107395 NA non-coding upstream 24632 3857998 ~ 3858382 (-)
G107400 NA non-coding upstream 39192 3872558 ~ 3872928 (-)
LOC110506994 carmil1 other downstream 23710 3705036 ~ 3924570 (-)
G106003 NA other downstream 1314765 2483860 ~ 2485123 (-)
G106001 NA other downstream 1316532 2482941 ~ 2483356 (-)
G105938 NA other downstream 1436357 2362999 ~ 2363531 (-)
G105636 NA other downstream 1679387 2118079 ~ 2120501 (-)
G107456 NA other upstream 157960 3991326 ~ 3992847 (-)
G107574 NA other upstream 462059 4295425 ~ 4296815 (-)
G107576 NA other upstream 464079 4297445 ~ 4302456 (-)
G107755 NA other upstream 542556 4375922 ~ 4376423 (-)
G107843 NA other upstream 705869 4539235 ~ 4539623 (-)

Expression


Co-expression Network