Gene
RNA
| Item | Value |
|---|---|
| gene id | G107477 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 4039468 ~ 4039691 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU121910 | True | 224 | lncRNA | 0.38 | 1 | 4039468 | 4039691 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520706 | LOC106574239 | coding | downstream | 51832 | 3940390 ~ 3987636 (-) |
| LOC110506163 | LOC106574253 | coding | downstream | 105848 | 3930634 ~ 3933620 (-) |
| LOC110506994 | carmil1 | coding | downstream | 114898 | 3705036 ~ 3924570 (-) |
| LOC110505062 | LOC106572986 | coding | downstream | 338454 | 3676265 ~ 3701014 (-) |
| LOC118937343 | NA | coding | downstream | 396181 | 3641294 ~ 3643287 (-) |
| enpp2 | LOC106573026 | coding | upstream | 82619 | 4122310 ~ 4167024 (-) |
| taf2 | LOC106572977 | coding | upstream | 131052 | 4170743 ~ 4223204 (-) |
| dscc1 | LOC106595460 | coding | upstream | 187591 | 4227282 ~ 4236792 (-) |
| mrpl13 | LOC106606163 | coding | upstream | 535746 | 4575437 ~ 4602797 (-) |
| sntb1 | LOC106595750 | coding | upstream | 622642 | 4662333 ~ 4740098 (-) |
| G107476 | NA | non-coding | downstream | 1493 | 4037629 ~ 4037975 (-) |
| G107472 | NA | non-coding | downstream | 5182 | 4033900 ~ 4034286 (-) |
| G107471 | NA | non-coding | downstream | 5697 | 4033395 ~ 4033771 (-) |
| G107468 | NA | non-coding | downstream | 16444 | 4020349 ~ 4023024 (-) |
| G107463 | NA | non-coding | downstream | 26933 | 4012076 ~ 4012535 (-) |
| G107478 | NA | non-coding | upstream | 594 | 4040285 ~ 4041214 (-) |
| G107480 | LOC106594376 | non-coding | upstream | 2802 | 4042493 ~ 4119824 (-) |
| G107488 | NA | non-coding | upstream | 19959 | 4059650 ~ 4060761 (-) |
| G107489 | NA | non-coding | upstream | 21487 | 4061178 ~ 4062165 (-) |
| G107501 | NA | non-coding | upstream | 52230 | 4091921 ~ 4093983 (-) |
| G107456 | NA | other | downstream | 46621 | 3991326 ~ 3992847 (-) |
| G106003 | NA | other | downstream | 1554345 | 2483860 ~ 2485123 (-) |
| G106001 | NA | other | downstream | 1556112 | 2482941 ~ 2483356 (-) |
| G105938 | NA | other | downstream | 1675937 | 2362999 ~ 2363531 (-) |
| G107574 | NA | other | upstream | 255734 | 4295425 ~ 4296815 (-) |
| G107576 | NA | other | upstream | 257754 | 4297445 ~ 4302456 (-) |
| G107755 | NA | other | upstream | 336231 | 4375922 ~ 4376423 (-) |
| G107843 | NA | other | upstream | 499544 | 4539235 ~ 4539623 (-) |
| G107849 | NA | other | upstream | 510622 | 4550313 ~ 4551965 (-) |
