G106793


Basic Information

Item Value
gene id G106793
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4054266 ~ 4054652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120891
CACCATAACGTAATGCTTTATAAAtccattacatgacattacagtaAATACTCAGCTTGATCAAAGTTTCCTTTCCAGGTAATTTACTAAGAGATGTTAGAGTAAGTTTAAAATGTAAATGAGGCTTAAAGAGGGGTTACTAACCATCAAAGTGAGTTTAAAATATCCACTGCACATACTACTGCTGTTGATTAAGCTGAGACTGACTGAAGCCAAATTTGTAATTGCCTTTAATTTTACATTGCATGAAAGGATCACTAAACTAAAACGCATCACAAATGGTGCC

Function

NR:

description
PREDICTED: polyribonucleotide 5'-hydroxyl-kinase Clp1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120891 True 286 lncRNA 0.34 2 4054266 4054652

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 632167 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 1074073 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 1075742 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1633645 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1876270 2166121 ~ 2177996 (+)
mal2 mal2 coding downstream 11340 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 58470 4113122 ~ 4119742 (+)
deptor deptor coding downstream 182228 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 273331 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 548306 4602958 ~ 4654733 (+)
G106790 NA non-coding upstream 6642 4046707 ~ 4047624 (+)
G106773 NA non-coding upstream 28414 4025592 ~ 4025852 (+)
G106764 NA non-coding upstream 41727 4012139 ~ 4012539 (+)
G106761 NA non-coding upstream 45843 4007937 ~ 4008423 (+)
G106755 NA non-coding upstream 60656 3993333 ~ 3993610 (+)
G106795 NA non-coding downstream 22626 4077278 ~ 4083492 (+)
G106797 NA non-coding downstream 41044 4095696 ~ 4096869 (+)
G106814 NA non-coding downstream 83161 4137813 ~ 4138496 (+)
G106831 NA non-coding downstream 113068 4167720 ~ 4168317 (+)
G106806 NA non-coding downstream 132166 4186818 ~ 4189033 (+)
G106775 NA other upstream 26672 4027075 ~ 4027594 (+)
G106575 NA other upstream 253914 3639434 ~ 3800352 (+)
G106595 NA other upstream 376416 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 663233 3006312 ~ 3391033 (+)
G107922 NA other downstream 689516 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 754087 4808739 ~ 4811575 (+)
G108048 NA other downstream 803259 4857911 ~ 4858274 (+)
G108280 NA other downstream 1081704 5136356 ~ 5136992 (+)

Expression


Co-expression Network